RDRP_LDCPR
ID RDRP_LDCPR Reviewed; 1225 AA.
AC Q91IE0;
DT 11-JAN-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 29-SEP-2021, entry version 51.
DE RecName: Full=RNA-directed RNA polymerase VP2;
DE EC=2.7.7.48;
GN Name=S2;
OS Lymantria dispar cypovirus 1 (isolate Rao) (LdCPV-1).
OC Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes;
OC Reovirales; Reoviridae; Spinareovirinae; Cypovirus.
OX NCBI_TaxID=648169;
OH NCBI_TaxID=13123; Lymantria dispar (Gypsy moth) (Porthetria dispar).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RA Rao S., Shapiro M., Lynn D., Hagiwara K., Blackmon B., Fang G.,
RA Carner G.R.;
RT "Identification of dsRNA electrophoretypes of two cypoviruses from a dual
RT infection in gypsy moth, Lymantria dispar.";
RL Submitted (JUN-2001) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: RNA-directed RNA polymerase that is involved in transcription
CC and genome replication. Following infection, it catalyzes the synthesis
CC of fully conservative plus strands. After core assembly, which consists
CC in recruitment of one capped plus-strand for each genomic segments and
CC polymerase complexes, the polymerase switches mode and catalyzes the
CC synthesis of complementary minus-strands (By similarity).
CC {ECO:0000255|PROSITE-ProRule:PRU00539}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.48; Evidence={ECO:0000255|PROSITE-ProRule:PRU00539};
CC -!- SUBUNIT: Interacts with VP6. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the reoviridae RNA-directed RNA polymerase
CC family. {ECO:0000305}.
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DR EMBL; AF389463; AAK73521.1; -; Genomic_RNA.
DR RefSeq; NP_149147.1; NC_003017.1.
DR SMR; Q91IE0; -.
DR GeneID; 2598189; -.
DR KEGG; vg:2598189; -.
DR Proteomes; UP000006712; Genome.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003968; F:RNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0019079; P:viral genome replication; IEA:InterPro.
DR InterPro; IPR007097; RNA-dir_pol_reovirus.
DR PROSITE; PS50523; RDRP_DSRNA_REO; 1.
PE 3: Inferred from homology;
KW Hydrolase; Nucleotide-binding; Nucleotidyltransferase; Reference proteome;
KW RNA-directed RNA polymerase; Transferase; Viral RNA replication.
FT CHAIN 1..1225
FT /note="RNA-directed RNA polymerase VP2"
FT /id="PRO_0000403202"
FT DOMAIN 497..727
FT /note="RdRp catalytic"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00539"
SQ SEQUENCE 1225 AA; 138847 MW; 614964068B1AB37D CRC64;
MLPNTELHTT EFSKTRKFTR QSFKQIEQLT ASLANDRVAR HKFLFNNSLP LISDYSGEDS
NGHQLQATIK IPDEITNPKE YDPSDYPLAE DESFFKQGHK YDYLVTFRAG SLTNTYEPKT
KMYKLHAALD RLMHVKQRKS RFADLWRELC AVIASLDVWY QTTNYPLRTY VKFLFHKGDE
FPFYESPSQD KIVFNDKSVA SILPTFVYTC CQVGTAIMSG ILTHVESIAA MNHFLHCAKD
SYIDEKLKVK GIGRSWYQEA LHNVGQVTVP VWSQFNEIIG HRTKNTSEPH FVSATFTALR
AKRAELLYSE FNDYINRALR LSKTQNDVAN YYAACRAMTN DGTFLATLTE LSLDAAVFPR
IEQRLVTRPA VLMSNARHES LRQKYTDGVG SIAQSYLSSF TDEVARRVNG IHHDEAWLNF
LTTSSPGRKL TEIEKLEVGG DVAAWSNSRI VMQAVFAREY RTPERIFKSL KAPIKLVERQ
QSDRRQRAIS GLDNDRLFLS FMPYTIGKQI YDLNDNAAQG KQAGNAFDIG EMLYWTSQRN
VLLSSIDVAG MDASVTTNTK DIYNTFVLDV ASKCTVPRFG PYYAKNMEVF EVGKRQSQVK
YVNAAWQACA LEAANSQTST SYESEIFGQV KNAEGTYPSG RADTSTHHTV LLQGLVRGNE
LKRASDGKNS CLATIKILGD DIMEIFQGSQ DDTHHHAVSN ANVLNESGFA TTAELSQNSI
VLLQQLVVNG TFWGFADRIS LWTREDTKDI GRLNLAMMEL NALLDDLLFR VRRPEGLKML
GFFCGAICLR RFTLSVDNNL YDSTYNSLSK YMTLIKYDKN PDFDSTLMSL ILPLTWLFMP
RGGEYPAYPF ERRDGTFTED ESMFTARGAY KRRLLYDISN IREMIQQNSL ALDDELLHEY
GFTGASLLID LNILDLIDEV KKEDISPVKV SELATSLEQL GKLGEREKSR RAASDLKVRG
HALSNDIVYG YGLQEKIQKS AMATKETTVQ SKRISLRLHE VIATKTRDYR IPTTPADALH
LYEFEGEEVV MDLLPHAKHT SYSNLAYNMS FGSDGWFAFA LLGGLDRSAI LLRLDVASIR
GNYHKFSYDD PVFKQGYKIY KSDATSLDDF FIAISAGPKE QGILLRAFAY YSLYGNVEYH
YVLSPRQLFF LSDNPVSAER LVRIPPSYYV STQCRALYNI FSYLHILRSI TSHEGKRLKM
VLHAGLIAYV RGTSSSAILP EADTV