RDRP_MCMVK
ID RDRP_MCMVK Reviewed; 965 AA.
AC P11640; Q9IBM2;
DT 01-OCT-1989, integrated into UniProtKB/Swiss-Prot.
DT 05-OCT-2010, sequence version 3.
DT 25-MAY-2022, entry version 85.
DE RecName: Full=RNA-directed RNA polymerase {ECO:0000255|PROSITE-ProRule:PRU00539};
DE EC=2.7.7.48 {ECO:0000255|PROSITE-ProRule:PRU00539};
DE AltName: Full=111 kDa protein;
DE AltName: Full=Protein p111;
DE Contains:
DE RecName: Full=Protein p50;
GN ORFNames=ORF2;
OS Maize chlorotic mottle virus (isolate United States/Kansas/1987) (MCMV).
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC Tolivirales; Tombusviridae; Procedovirinae; Machlomovirus.
OX NCBI_TaxID=882210;
OH NCBI_TaxID=4577; Zea mays (Maize).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=2726455; DOI=10.1093/nar/17.8.3163;
RA Nutter R.C., Scheets K., Panganiban L.C., Lommel S.A.;
RT "The complete nucleotide sequence of the maize chlorotic mottle virus
RT genome.";
RL Nucleic Acids Res. 17:3163-3177(1989).
RN [2]
RP FUNCTION.
RX PubMed=27242072; DOI=10.1016/j.virusres.2016.04.024;
RA Scheets K.;
RT "Analysis of gene functions in Maize chlorotic mottle virus.";
RL Virus Res. 222:71-79(2016).
CC -!- FUNCTION: RNA-dependent RNA polymerase that plays an essential role in
CC the virus replication. {ECO:0000269|PubMed:27242072}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.48; Evidence={ECO:0000255|PROSITE-ProRule:PRU00539};
CC -!- MISCELLANEOUS: Readthrough of the terminator UAG occurs at position
CC 439.
CC -!- SIMILARITY: Belongs to the tombusviridae RNA polymerase family.
CC {ECO:0000305}.
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DR EMBL; X14736; CAA32862.1; -; Genomic_RNA.
DR EMBL; X14736; CAB55589.1; -; Genomic_RNA.
DR PIR; JQ0058; JQ0058.
DR RefSeq; NP_619718.1; NC_003627.1.
DR RefSeq; NP_619719.1; NC_003627.1.
DR PRIDE; P11640; -.
DR GeneID; 2652939; -.
DR GeneID; 2652940; -.
DR KEGG; vg:2652939; -.
DR KEGG; vg:2652940; -.
DR Proteomes; UP000007071; Genome.
DR GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003968; F:RNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0039694; P:viral RNA genome replication; IEA:InterPro.
DR Gene3D; 3.30.70.270; -; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR007094; RNA-dir_pol_PSvirus.
DR InterPro; IPR002166; RNA_pol_HCV.
DR Pfam; PF00998; RdRP_3; 1.
DR SUPFAM; SSF56672; SSF56672; 1.
DR PROSITE; PS50507; RDRP_SSRNA_POS; 1.
PE 3: Inferred from homology;
KW Nucleotide-binding; Nucleotidyltransferase; Reference proteome;
KW RNA suppression of termination; RNA-directed RNA polymerase; Transferase;
KW Viral RNA replication.
FT CHAIN 1..965
FT /note="RNA-directed RNA polymerase"
FT /id="PRO_0000040211"
FT CHAIN 1..438
FT /note="Protein p50"
FT /id="PRO_0000040212"
FT DOMAIN 662..778
FT /note="RdRp catalytic"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00539"
SQ SEQUENCE 965 AA; 110880 MW; 8507E5D2DF86C612 CRC64;
MATLPSIHAF WKLWWPTFSE ERKMTVVQAL RNGLTRKLFQ ITQIAQQILR WPPYIRERMT
SSLGQSLVKT FQTLLGIRKA LSRLCLTRNM NVDIFTMLLI PFKFLSQLCS QIVASANFVI
QTFRHGLSRG LCLARCRNPE TMRSGWSKHT LQMQNCSSTS PLMTPFQPQI ARDLSNPHGL
WMSTRNKLTR TGGSAIQQTS RYVRLAVRFS LLAAGAYISC VLARKALKEY VYRWELKSDQ
ELPTREQSQI SQVEQAMEQN GAMMVMKLNG PTAPILSLQD CLTKHVLVPE IVDEEGTVTQ
KEQSTFLIRE FGPAVRNLVT LAKLEFGGIP KKTTANELTV WRFLVRKCEH ANMNPTDSRT
AISMALPYVF MPCRTDVGRA SIPLRDESIE ICRQYRAQFV EETPLRRVFN NPLSGKAWRN
WVRHLGGLDD PALFQELKXG CLEEWLGVQS RRTRARHPKL RSHFKDTRHK TRRVFRIAGL
GNLYEFGVHN NSAVNLERGL MERVFYVKDD KGELVSCPEP ISGIFWKNLK GFRNSIVHHV
GHRHPVSRET FLAYYTGPKR TMYEKAVNSL YEMPVSYDDA KLKTFVKAEK INLTKKADPV
PRVIQPRAPR YNVELGRYLR PVEHPIYHAI DKIWGGPTIM KGYSVEQIGR HIENAFRSFT
DPVAIGFDAS RFDQHVSVEA LRWEHSVYSR IYGYPELLTQ LLRWQIHNRG TAYASDGAFN
YQVDGKRMSG DMNISLGNCI LATAITHDFV TKLGIPARLI NNGDDNVLIC PAVEVGRVRQ
ELYRHWLNYG FEVISEEPVY ILEQVEFCQM RPVFDGTQYT MMRDPRTTMS KDAYAVTPFN
TPTAARRWMR AVGECGLSLT GGLPVKQEYY TALVKHGLDP KNIKQGKDFD SGLYYLSKLS
NRKWQEVQES ARYSFWLAFG YTPDEQRALE EYFKSWTPTF EWSTTGILAE IPECLLLKHN
PLPPT