RDRP_MRNV
ID RDRP_MRNV Reviewed; 1045 AA.
AC Q6XNL5;
DT 21-FEB-2006, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 29-SEP-2021, entry version 57.
DE RecName: Full=RNA-directed RNA polymerase;
DE Short=RdRp;
DE EC=2.7.7.48;
DE AltName: Full=RNA replicase;
OS Macrobrachium rosenbergii nodavirus (MrNV).
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Magsaviricetes;
OC Nodamuvirales; Nodaviridae; unclassified Nodaviridae.
OX NCBI_TaxID=222557;
OH NCBI_TaxID=79674; Macrobrachium rosenbergii (Giant fresh water prawn).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA Bonami J.-R., Sri Widada J., Richard V.R., Vincent A., Durand S.P.;
RT "Nucleotide sequence of the MrNV-RNA-1 of Macrobrachium rosenbergii.";
RL Submitted (JAN-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: RNA-dependent RNA polymerase which replicates the viral
CC genome composed of 2 RNA segments, RNA1 AND RNA2. {ECO:0000305}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.48;
CC -!- SIMILARITY: Belongs to the nodaviridae RNA polymerase family.
CC {ECO:0000305}.
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DR EMBL; AY222839; AAO60068.1; -; Genomic_RNA.
DR RefSeq; NP_919036.1; NC_005094.1.
DR GeneID; 2943295; -.
DR KEGG; vg:2943295; -.
DR Proteomes; UP000203150; Genome.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003968; F:RNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR043647; Noda_Vmethyltr_dom.
DR InterPro; IPR001205; RNA-dir_pol_C.
DR InterPro; IPR020237; Viral_RNA-dir_pol_C.
DR Pfam; PF19222; Noda_Vmethyltr; 1.
DR Pfam; PF00680; RdRP_1; 1.
DR Pfam; PF17501; Viral_RdRp_C; 1.
DR SUPFAM; SSF56672; SSF56672; 1.
PE 3: Inferred from homology;
KW Nucleotidyltransferase; RNA-directed RNA polymerase; Transferase;
KW Viral RNA replication.
FT CHAIN 1..1045
FT /note="RNA-directed RNA polymerase"
FT /id="PRO_0000223687"
FT DOMAIN 593..718
FT /note="RdRp catalytic"
FT REGION 916..1045
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 943..982
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 995..1013
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1045 AA; 118394 MW; 229E7D36C9376032 CRC64;
MKCNNLLYGV ELPMCLQSSM GMVVVTGLAI VYLVIYILIY SFTHGPRLSR RLASYVVIGP
YEAIAKSRPA MALQRAMVDL TRRDVRTDWY PLNNLLMNKP HRLSENGHKT SGAVRDAARN
LITSAITSLG MDKYEISPGG HTVDEQLASH RHYAVNDLHR ASADDAVKEN AVIVAIDTDY
YLRDPSIYFS NNNPFILHTF QPITVAGKDG DVRFTISDNQ VDYRVDGGGR WQHKVWNWCD
YGEFLYLKNI LGILSINWWL SFFGIRKVIY QKIQHARPWV DCPNRALVWG LPQFTRYMIT
WLPIEMNARE LSRVNYQCAS RPGWNCLVDH TSTKLVASIG REGNDCHVEL AKEDLDVVLG
LSTMQSVTSR LLQMGYKQPQ TLATVCQFYN SAAYDILSCS IVARPSQPPV HWPLASEIDQ
PTTSFRNYSN NIVTCGNLCP QLKRWEVLSN SLEHRVTMVA NNKVPTPRIA RFAEEYVRLV
VPEANVGVPY SLEDARKELD KPTQVNAVNQ IWETVDMEVR RLIEAFVKNE PTNKSGRIIS
SFADSRFLLK FSTYTLAFRD EVLHAEHNRH WFCPGLTPNE IADKVCDYVR GVATPAEGDF
SNFDGRVSAW CQENVMNAVY HRWFNRKFSK ELQKYTSMLV SCPARAKRFG FQYEPGVGVK
SGSPTTCDLN SVLNNFTQYA AVRLTKPDLS PQEAFEQTGL SFGDDSLFDK QYQLRWNYVV
EQLGMELKVE PFDPSNGVTF LARVFPDPYS TNTSFQDPLR TWRKLNMTSR TCVPVESAAL
DRVSGYLVTD KYSPVTSEYC HMIERCYMNT AESVTRRRQR KDCDREKPYW LVSGGAWPQR
EGDYELMMRV TAARTGFEES KLINLISQFQ SVHDPWDIKP LDYQEPSPYK DTLDIDGQPV
DAVDERQYQN ERNTVNLRAG AAISQMPVPS VPGGEDCNRQ SADMPGPKSS EGSEQLQGLP
EQDGSNRLQC HRQPTFKAKG GSNTKGRSRK SRNGGRSISS KTANPTTHEV GGGNGKTRVT
IAKRSGPKRP HNVVSNAWET LNDNR