RDRP_OCSVU
ID RDRP_OCSVU Reviewed; 752 AA.
AC Q83927; Q83926;
DT 05-OCT-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 29-SEP-2021, entry version 77.
DE RecName: Full=RNA-directed RNA polymerase;
DE EC=2.7.7.48;
DE AltName: Full=Protein p84;
DE Contains:
DE RecName: Full=Protein p23;
GN ORFNames=ORF1;
OS Oat chlorotic stunt virus (isolate United Kingdom) (OCSV).
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC Tolivirales; Tombusviridae; Procedovirinae; Avenavirus.
OX NCBI_TaxID=652110;
OH NCBI_TaxID=4498; Avena sativa (Oat).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=7636483; DOI=10.1099/0022-1317-76-8-2025;
RA Boonham N., Henry C.M., Wood K.R.;
RT "The nucleotide sequence and proposed genome organization of oat chlorotic
RT stunt virus, a new soil-borne virus of cereals.";
RL J. Gen. Virol. 76:2025-2034(1995).
CC -!- FUNCTION: RNA-dependent RNA polymerase that plays an essential role in
CC the virus replication. {ECO:0000305}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.48; Evidence={ECO:0000255|PROSITE-ProRule:PRU00539};
CC -!- MISCELLANEOUS: Readthrough of the terminator UAG occurs at position
CC 213.
CC -!- SIMILARITY: Belongs to the tombusviridae RNA polymerase family.
CC {ECO:0000305}.
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DR EMBL; X83964; CAA58796.1; -; Genomic_RNA.
DR EMBL; X83964; CAA58797.1; -; Genomic_RNA.
DR RefSeq; NP_619751.1; NC_003633.1.
DR RefSeq; NP_619752.1; NC_003633.1.
DR GeneID; 1732851; -.
DR GeneID; 940248; -.
DR KEGG; vg:1732851; -.
DR KEGG; vg:940248; -.
DR Proteomes; UP000000573; Genome.
DR GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003968; F:RNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0039694; P:viral RNA genome replication; IEA:InterPro.
DR Gene3D; 3.30.70.270; -; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR007094; RNA-dir_pol_PSvirus.
DR InterPro; IPR002166; RNA_pol_HCV.
DR Pfam; PF00998; RdRP_3; 1.
DR SUPFAM; SSF56672; SSF56672; 1.
DR PROSITE; PS50507; RDRP_SSRNA_POS; 1.
PE 3: Inferred from homology;
KW Nucleotide-binding; Nucleotidyltransferase; Reference proteome;
KW RNA suppression of termination; RNA-directed RNA polymerase; Transferase;
KW Viral RNA replication.
FT CHAIN 1..752
FT /note="RNA-directed RNA polymerase"
FT /id="PRO_0000399490"
FT CHAIN 1..212
FT /note="Protein p23"
FT /id="PRO_0000399491"
FT DOMAIN 442..561
FT /note="RdRp catalytic"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00539"
SQ SEQUENCE 752 AA; 84449 MW; 798BB83729EC00C2 CRC64;
MSWPSLSGVP NGSSSVSTWL SVTHPRRSLP KELLTAFDTC NVAPEALLVL RSTSLMILEE
TCVVVGAAEM PTAEDNSGRE LFIGSNGDPM ERKTRTAHHA IKKTVRIKKG HRTTFAMTVA
NGAYVKFGAR PLTEANVLVV RKWIVKLIAD EYKDLRVCDQ ALVIDRATFL SFIPTMAWNN
YKFIFHGKNA VTDRVAGENL FSRIAQWANP GKXGCPVVVT GQGCVISRAP DCAQLRVKRL
LGVTKNRTCM RVSGVSPNIQ IIPFNNDITT LERAIKERVF FVKNLDKGSP TKFVSPPRPA
PGVFAQRLSN TLGLLVPFLP STAPMSHQQF VDSTPSRKRK VYQQALEDIS CHGLNLETDS
KVKVFVKYEK TDHTSKADPV PRVISPRDPK YNLALGRYLR PMEERIFKAL GKLFGHRTVM
KGMDTDVTAR VIQEKWNMFN KPVAIGLDAS RFDQHVSLEA LEFEHSVYLK CVRRMVDKRK
LGNILRHQLL NKCYGNTPDG AVSYTIEGTR MSGDMNTSLG NCVLMCMMIH AYGLHKSVNI
QLANNGDDCV VFLEQSDLAT FSEGLFEWFL EMGFNMAIEE PSYELEHIEF CQCRPVFDGV
KYTMCRNPRT AIAKDSVYLK HVDQFVTYSS WLNAVGTGGL ALAGGLPIFD AFYTCYKRNS
NSHWFSGRKG RLKTLSSVDD SLPWFMRELG LKGKRSSAEP LPASRASFYL AWGVTPCEQL
ELEKYYKSFK LDTSTLLEEH LWQPRGVFPD ED