RECA3_ARATH
ID RECA3_ARATH Reviewed; 430 AA.
AC Q9ZUP2; A1L4V8;
DT 24-JAN-2006, integrated into UniProtKB/Swiss-Prot.
DT 14-OCT-2008, sequence version 2.
DT 03-AUG-2022, entry version 138.
DE RecName: Full=DNA repair protein recA homolog 3, mitochondrial;
DE AltName: Full=Recombinase A homolog 3;
DE Flags: Precursor;
GN OrderedLocusNames=At2g19490; ORFNames=F3P11.9;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Bautista V.R., Kim C.J., Chen H., Wu S.Y., De Los Reyes C., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Involved in recombination ability and DNA strand transfer
CC activity. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the RecA family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD10148.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC005917; AAD10148.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002685; AEC06888.1; -; Genomic_DNA.
DR EMBL; BT029745; ABM06015.1; -; mRNA.
DR PIR; D84577; D84577.
DR RefSeq; NP_179539.2; NM_127507.3.
DR AlphaFoldDB; Q9ZUP2; -.
DR SMR; Q9ZUP2; -.
DR BioGRID; 1823; 1.
DR STRING; 3702.AT2G19490.1; -.
DR iPTMnet; Q9ZUP2; -.
DR PaxDb; Q9ZUP2; -.
DR PRIDE; Q9ZUP2; -.
DR ProteomicsDB; 225929; -.
DR EnsemblPlants; AT2G19490.1; AT2G19490.1; AT2G19490.
DR GeneID; 816468; -.
DR Gramene; AT2G19490.1; AT2G19490.1; AT2G19490.
DR KEGG; ath:AT2G19490; -.
DR Araport; AT2G19490; -.
DR TAIR; locus:2050439; AT2G19490.
DR eggNOG; KOG1433; Eukaryota.
DR HOGENOM; CLU_040469_0_2_1; -.
DR InParanoid; Q9ZUP2; -.
DR OMA; DYGEQAL; -.
DR OrthoDB; 1158328at2759; -.
DR PhylomeDB; Q9ZUP2; -.
DR PRO; PR:Q9ZUP2; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q9ZUP2; baseline and differential.
DR Genevisible; Q9ZUP2; AT.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0140664; F:ATP-dependent DNA damage sensor activity; IEA:InterPro.
DR GO; GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR CDD; cd00983; recA; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00268; RecA; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR013765; DNA_recomb/repair_RecA.
DR InterPro; IPR020584; DNA_recomb/repair_RecA_CS.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR020588; RecA_ATP-bd.
DR InterPro; IPR023400; RecA_C.
DR InterPro; IPR020587; RecA_monomer-monomer_interface.
DR PANTHER; PTHR45900; PTHR45900; 1.
DR Pfam; PF00154; RecA; 1.
DR PRINTS; PR00142; RECA.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR SUPFAM; SSF54752; SSF54752; 1.
DR TIGRFAMs; TIGR02012; tigrfam_recA; 1.
DR PROSITE; PS00321; RECA_1; 1.
DR PROSITE; PS50162; RECA_2; 1.
DR PROSITE; PS50163; RECA_3; 1.
PE 2: Evidence at transcript level;
KW ATP-binding; DNA damage; DNA recombination; DNA-binding; Mitochondrion;
KW Nucleotide-binding; Reference proteome; Transit peptide.
FT TRANSIT 1..35
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 36..430
FT /note="DNA repair protein recA homolog 3, mitochondrial"
FT /id="PRO_0000122913"
FT REGION 385..415
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 119..126
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
SQ SEQUENCE 430 AA; 46160 MW; A063174BA4B7F42E CRC64;
MARILRNVYS LRSSLFSSEL LRRSVVGTSF QLRGFAAKAK KKSKSDGNGS SEEGMSKKEI
ALQQALDQIT SSFGKGSIMY LGRAVSPRNV PVFSTGSFAL DVALGVGGLP KGRVVEIYGP
EASGKTTLAL HVIAEAQKQG GTCVFVDAEH ALDSSLAKAI GVNTENLLLS QPDCGEQALS
LVDTLIRSGS VDVIVVDSVA ALVPKGELEG EMGDAHMAMQ ARLMSQALRK LSHSLSLSQT
LLIFINQVRS KLSTFGGFGG PTEVTCGGNA LKFYASMRLN IKRIGLIKKG EETTGSQVSV
KIVKNKLAPP FRTAQFELEF GKGICKITEI IDLSIKHKFI AKNGTFYNLN GKNYHGKEAL
KRFLKQNESD QEELMKKLQD KLIADEAADK ETESESEEED SLRVVVSPDN TDDESPALVV
GAAAVVVEAA
