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RECB_ECOLI
ID   RECB_ECOLI              Reviewed;        1180 AA.
AC   P08394; Q2MA17;
DT   01-AUG-1988, integrated into UniProtKB/Swiss-Prot.
DT   01-AUG-1988, sequence version 1.
DT   03-AUG-2022, entry version 188.
DE   RecName: Full=RecBCD enzyme subunit RecB {ECO:0000255|HAMAP-Rule:MF_01485};
DE            EC=3.1.11.5 {ECO:0000255|HAMAP-Rule:MF_01485};
DE   AltName: Full=Exodeoxyribonuclease V 135 kDa polypeptide;
DE   AltName: Full=Exodeoxyribonuclease V beta chain;
DE   AltName: Full=Exonuclease V subunit RecB {ECO:0000255|HAMAP-Rule:MF_01485};
DE            Short=ExoV subunit RecB {ECO:0000255|HAMAP-Rule:MF_01485};
DE   AltName: Full=Helicase/nuclease RecBCD subunit RecB {ECO:0000255|HAMAP-Rule:MF_01485};
GN   Name=recB {ECO:0000255|HAMAP-Rule:MF_01485}; Synonyms=ior, rorA;
GN   OrderedLocusNames=b2820, JW2788;
OS   Escherichia coli (strain K12).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=83333;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX   PubMed=3537960; DOI=10.1093/nar/14.21.8573;
RA   Finch P.W., Storey A., Chapman K.E., Brown K., Hickson I.D., Emmerson P.T.;
RT   "Complete nucleotide sequence of the Escherichia coli recB gene.";
RL   Nucleic Acids Res. 14:8573-8582(1986).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION IN RECA LOADING, AND
RP   MUTAGENESIS OF THR-807.
RC   STRAIN=V1000;
RX   PubMed=10766864; DOI=10.1074/jbc.275.16.12261;
RA   Arnold D.A., Kowalczykowski S.C.;
RT   "Facilitated loading of RecA protein is essential to recombination by
RT   RecBCD enzyme.";
RL   J. Biol. Chem. 275:12261-12265(2000).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / MG1655 / ATCC 47076;
RX   PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA   Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA   Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA   Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA   Shao Y.;
RT   "The complete genome sequence of Escherichia coli K-12.";
RL   Science 277:1453-1462(1997).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX   PubMed=16738553; DOI=10.1038/msb4100049;
RA   Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA   Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT   "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT   and W3110.";
RL   Mol. Syst. Biol. 2:E1-E5(2006).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-11.
RX   PubMed=3534791; DOI=10.1093/nar/14.19.7695;
RA   Finch P.W., Wilson R.E., Brown K., Hickson I.D., Emmerson P.T.;
RT   "Complete nucleotide sequence of the Escherichia coli ptr gene encoding
RT   protease III.";
RL   Nucleic Acids Res. 14:7695-7703(1986).
RN   [6]
RP   PROTEIN SEQUENCE OF 2-11, FUNCTION AS AN EXONUCLEASE; HELICASE AND ATPASE,
RP   AND SUBUNIT.
RX   PubMed=1618858; DOI=10.1016/s0021-9258(18)42249-1;
RA   Masterson C., Boehmer P.E., McDonald F., Chaudhuri S., Hickson I.D.,
RA   Emmerson P.T.;
RT   "Reconstitution of the activities of the RecBCD holoenzyme of Escherichia
RT   coli from the purified subunits.";
RL   J. Biol. Chem. 267:13564-13572(1992).
RN   [7]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1093-1180.
RX   PubMed=3537961; DOI=10.1093/nar/14.21.8583;
RA   Finch P.W., Storey A., Brown K., Hickson I.D., Emmerson P.T.;
RT   "Complete nucleotide sequence of recD, the structural gene for the alpha
RT   subunit of Exonuclease V of Escherichia coli.";
RL   Nucleic Acids Res. 14:8583-8594(1986).
RN   [8]
RP   FUNCTION IN DEGRADATION OF LAMBDA VIRUS DNA, AND DISRUPTION PHENOTYPE.
RC   STRAIN=K12;
RX   PubMed=4562392; DOI=10.1128/jb.112.1.161-169.1972;
RA   Simmon V.F., Lederberg S.;
RT   "Degradation of bacteriophage lambda deoxyribonucleic acid after
RT   restriction by Escherichia coli K-12.";
RL   J. Bacteriol. 112:161-169(1972).
RN   [9]
RP   FUNCTION AS AN ENDO- AND EXODEOXYRIBONUCLEASE, ATP-DEPENDENCE, AND SUBUNIT.
RC   STRAIN=K12;
RX   PubMed=4552016; DOI=10.1016/s0021-9258(19)45550-6;
RA   Goldmark P.J., Linn S.;
RT   "Purification and properties of the recBC DNase of Escherichia coli K-12.";
RL   J. Biol. Chem. 247:1849-1860(1972).
RN   [10]
RP   FUNCTION, SUBSTRATES, AND PROCESSIVITY.
RX   PubMed=4268693; DOI=10.1016/s0021-9258(19)43644-2;
RA   Karu A.E., MacKay V., Goldmark P.J., Linn S.;
RT   "The recBC deoxyribonuclease of Escherichia coli K-12. Substrate
RT   specificity and reaction intermediates.";
RL   J. Biol. Chem. 248:4874-4884(1973).
RN   [11]
RP   ACTIVITY REGULATION BY LAMBDA GAM PROTEIN (MICROBIAL INFECTION).
RX   PubMed=4275917; DOI=10.1073/pnas.70.8.2215;
RA   Sakaki Y., Karu A.E., Linn S., Echols H.;
RT   "Purification and properties of the gamma-protein specified by
RT   bacteriophage lambda: an inhibitor of the host RecBC recombination
RT   enzyme.";
RL   Proc. Natl. Acad. Sci. U.S.A. 70:2215-2219(1973).
RN   [12]
RP   FUNCTION IN DEGRADATION OF VIRUS DNA, AND DISRUPTION PHENOTYPE.
RX   PubMed=123277; DOI=10.1128/jvi.15.4.861-871.1975;
RA   Benzinger R., Enquist L.W., Skalka A.;
RT   "Transfection of Escherichia coli spheroplasts. V. Activity of recBC
RT   nuclease in rec+ and rec minus spheroplasts measured with different forms
RT   of bacteriophage DNA.";
RL   J. Virol. 15:861-871(1975).
RN   [13]
RP   DISRUPTION PHENOTYPE.
RX   PubMed=6389498; DOI=10.1128/jb.160.2.788-791.1984;
RA   Chaudhury A.M., Smith G.R.;
RT   "Escherichia coli recBC deletion mutants.";
RL   J. Bacteriol. 160:788-791(1984).
RN   [14]
RP   OPERON, AND SUBUNIT.
RX   PubMed=3526335; DOI=10.1073/pnas.83.15.5558;
RA   Amundsen S.K., Taylor A.F., Chaudhury A.M., Smith G.R.;
RT   "recD: the gene for an essential third subunit of exonuclease V.";
RL   Proc. Natl. Acad. Sci. U.S.A. 83:5558-5562(1986).
RN   [15]
RP   ACTIVITY REGULATION BY LAMBDA GAM PROTEIN (MICROBIAL INFECTION), AND
RP   INTERACTION WITH LAMBDA GAMS (MICROBIAL INFECTION).
RX   PubMed=1653221; DOI=10.1128/jb.173.18.5808-5821.1991;
RA   Murphy K.C.;
RT   "Lambda Gam protein inhibits the helicase and chi-stimulated recombination
RT   activities of Escherichia coli RecBCD enzyme.";
RL   J. Bacteriol. 173:5808-5821(1991).
RN   [16]
RP   FUNCTION, AND ACTIVITY REGULATION.
RX   PubMed=1535156; DOI=10.1073/pnas.89.12.5226;
RA   Taylor A.F., Smith G.R.;
RT   "RecBCD enzyme is altered upon cutting DNA at a chi recombination
RT   hotspot.";
RL   Proc. Natl. Acad. Sci. U.S.A. 89:5226-5230(1992).
RN   [17]
RP   FUNCTION IN HOMOLOGOUS RECOMBINATION.
RX   PubMed=7608206; DOI=10.1074/jbc.270.27.16360;
RA   Dixon D.A., Kowalczykowski S.C.;
RT   "Role of the Escherichia coli recombination hotspot, chi, in RecABCD-
RT   dependent homologous pairing.";
RL   J. Biol. Chem. 270:16360-16370(1995).
RN   [18]
RP   FUNCTION IN RECA-LOADING.
RX   PubMed=9230304; DOI=10.1016/s0092-8674(00)80315-3;
RA   Anderson D.G., Kowalczykowski S.C.;
RT   "The translocating RecBCD enzyme stimulates recombination by directing RecA
RT   protein onto ssDNA in a chi-regulated manner.";
RL   Cell 90:77-86(1997).
RN   [19]
RP   FUNCTION IN RECOGNITION OF CHI.
RX   PubMed=9192629; DOI=10.1073/pnas.94.13.6706;
RA   Bianco P.R., Kowalczykowski S.C.;
RT   "The recombination hotspot Chi is recognized by the translocating RecBCD
RT   enzyme as the single strand of DNA containing the sequence 5'-GCTGGTGG-
RT   3'.";
RL   Proc. Natl. Acad. Sci. U.S.A. 94:6706-6711(1997).
RN   [20]
RP   FUNCTION, ACTIVE SITE, DOMAIN, AND MUTAGENESIS OF ASP-1080.
RX   PubMed=9790841; DOI=10.1006/jmbi.1998.2127;
RA   Yu M., Souaya J., Julin D.A.;
RT   "Identification of the nuclease active site in the multifunctional RecBCD
RT   enzyme by creation of a chimeric enzyme.";
RL   J. Mol. Biol. 283:797-808(1998).
RN   [21]
RP   FUNCTION, INTERACTION WITH RECC, DOMAIN, AND DNA-BINDING.
RX   PubMed=9448271; DOI=10.1073/pnas.95.3.981;
RA   Yu M., Souaya J., Julin D.A.;
RT   "The 30-kDa C-terminal domain of the RecB protein is critical for the
RT   nuclease activity, but not the helicase activity, of the RecBCD enzyme from
RT   Escherichia coli.";
RL   Proc. Natl. Acad. Sci. U.S.A. 95:981-986(1998).
RN   [22]
RP   FUNCTION, ACTIVE SITE, DOMAIN, AND MUTAGENESIS OF ASP-1080.
RX   PubMed=10518611; DOI=10.1093/nar/27.21.4200;
RA   Zhang X.J., Julin D.A.;
RT   "Isolation and characterization of the C-terminal nuclease domain from the
RT   RecB protein of Escherichia coli.";
RL   Nucleic Acids Res. 27:4200-4207(1999).
RN   [23]
RP   FUNCTION, AND ACTIVITY REGULATION.
RX   PubMed=10197988; DOI=10.1101/gad.13.7.890;
RA   Taylor A.F., Smith G.R.;
RT   "Regulation of homologous recombination: Chi inactivates RecBCD enzyme by
RT   disassembly of the three subunits.";
RL   Genes Dev. 13:890-900(1999).
RN   [24]
RP   FUNCTION AS A SLOW 3'-5' HELICASE, AND MUTAGENESIS OF LYS-29.
RX   PubMed=12815437; DOI=10.1038/nature01674;
RA   Taylor A.F., Smith G.R.;
RT   "RecBCD enzyme is a DNA helicase with fast and slow motors of opposite
RT   polarity.";
RL   Nature 423:889-893(2003).
RN   [25]
RP   FUNCTION AS A BIPOLAR HELICASE.
RX   PubMed=12815438; DOI=10.1038/nature01673;
RA   Dillingham M.S., Spies M., Kowalczykowski S.C.;
RT   "RecBCD enzyme is a bipolar DNA helicase.";
RL   Nature 423:893-897(2003).
RN   [26]
RP   FUNCTION, RATE, DNA-BINDING, AND MUTAGENESIS OF LYS-29.
RX   PubMed=16041061; DOI=10.1074/jbc.m505520200;
RA   Dillingham M.S., Webb M.R., Kowalczykowski S.C.;
RT   "Bipolar DNA translocation contributes to highly processive DNA unwinding
RT   by RecBCD enzyme.";
RL   J. Biol. Chem. 280:37069-37077(2005).
RN   [27]
RP   FUNCTION AS A NUCLEASE, COFACTOR, AND MUTAGENESIS OF ASP-1067 AND ASP-1080.
RX   PubMed=16388588; DOI=10.1021/bi051150v;
RA   Sun J.Z., Julin D.A., Hu J.S.;
RT   "The nuclease domain of the Escherichia coli RecBCD enzyme catalyzes
RT   degradation of linear and circular single-stranded and double-stranded
RT   DNA.";
RL   Biochemistry 45:131-140(2006).
RN   [28]
RP   INTERACTION WITH RECA, SUBUNIT, AND DOMAIN.
RX   PubMed=16483938; DOI=10.1016/j.molcel.2006.01.007;
RA   Spies M., Kowalczykowski S.C.;
RT   "The RecA binding locus of RecBCD is a general domain for recruitment of
RT   DNA strand exchange proteins.";
RL   Mol. Cell 21:573-580(2006).
RN   [29]
RP   FUNCTION, AND MUTAGENESIS OF TYR-803 AND VAL-804.
RX   PubMed=18079176; DOI=10.1101/gad.1605807;
RA   Amundsen S.K., Taylor A.F., Reddy M., Smith G.R.;
RT   "Intersubunit signaling in RecBCD enzyme, a complex protein machine
RT   regulated by Chi hot spots.";
RL   Genes Dev. 21:3296-3307(2007).
RN   [30]
RP   FUNCTION IN DUAL DIRECTION TRANSLOCATION.
RX   PubMed=20852646; DOI=10.1038/nsmb.1901;
RA   Wu C.G., Bradford C., Lohman T.M.;
RT   "Escherichia coli RecBC helicase has two translocase activities controlled
RT   by a single ATPase motor.";
RL   Nat. Struct. Mol. Biol. 17:1210-1217(2010).
RN   [31]
RP   INTERACTION WITH CAS1.
RC   STRAIN=K12;
RX   PubMed=21219465; DOI=10.1111/j.1365-2958.2010.07465.x;
RA   Babu M., Beloglazova N., Flick R., Graham C., Skarina T., Nocek B.,
RA   Gagarinova A., Pogoutse O., Brown G., Binkowski A., Phanse S.,
RA   Joachimiak A., Koonin E.V., Savchenko A., Emili A., Greenblatt J.,
RA   Edwards A.M., Yakunin A.F.;
RT   "A dual function of the CRISPR-Cas system in bacterial antivirus immunity
RT   and DNA repair.";
RL   Mol. Microbiol. 79:484-502(2011).
RN   [32]
RP   FUNCTION, ENZYME RATE, ENZYME STATE SWITCHING, AND MUTAGENESIS OF LYS-29.
RX   PubMed=23851395; DOI=10.1038/nature12333;
RA   Liu B., Baskin R.J., Kowalczykowski S.C.;
RT   "DNA unwinding heterogeneity by RecBCD results from static molecules able
RT   to equilibrate.";
RL   Nature 500:482-485(2013).
RN   [33]
RP   FUNCTION, AND MODEL OF DOMAIN MOVEMENT.
RX   PubMed=25073102; DOI=10.1016/j.jmb.2014.07.017;
RA   Taylor A.F., Amundsen S.K., Guttman M., Lee K.K., Luo J., Ranish J.,
RA   Smith G.R.;
RT   "Control of RecBCD enzyme activity by DNA binding- and Chi hotspot-
RT   dependent conformational changes.";
RL   J. Mol. Biol. 426:3479-3499(2014).
RN   [34]
RP   DISRUPTION PHENOTYPE.
RC   STRAIN=K12 / BW25141;
RX   PubMed=33157039; DOI=10.1016/j.cell.2020.09.065;
RA   Millman A., Bernheim A., Stokar-Avihail A., Fedorenko T., Voichek M.,
RA   Leavitt A., Oppenheimer-Shaanan Y., Sorek R.;
RT   "Bacterial Retrons Function In Anti-Phage Defense.";
RL   Cell 183:1551-1561(2020).
RN   [35] {ECO:0007744|PDB:1W36}
RP   X-RAY CRYSTALLOGRAPHY (3.1 ANGSTROMS) IN COMPLEX WITH DNA, COFACTOR, AND
RP   SUBUNIT.
RX   PubMed=15538360; DOI=10.1038/nature02988;
RA   Singleton M.R., Dillingham M.S., Gaudier M., Kowalczykowski S.C.,
RA   Wigley D.B.;
RT   "Crystal structure of RecBCD enzyme reveals a machine for processing DNA
RT   breaks.";
RL   Nature 432:187-193(2004).
RN   [36] {ECO:0007744|PDB:3K70}
RP   X-RAY CRYSTALLOGRAPHY (3.59 ANGSTROMS) IN COMPLEX WITH DNA, COFACTOR, AND
RP   SUBUNIT.
RX   PubMed=18668125; DOI=10.1038/emboj.2008.144;
RA   Saikrishnan K., Griffiths S.P., Cook N., Court R., Wigley D.B.;
RT   "DNA binding to RecD: role of the 1B domain in SF1B helicase activity.";
RL   EMBO J. 27:2222-2229(2008).
RN   [37] {ECO:0007744|PDB:5LD2}
RP   STRUCTURE BY ELECTRON MICROSCOPY (3.83 ANGSTROMS) OF RECBCD IN COMPLEX WITH
RP   FORKED DNA SUBSTRATE, MUTAGENESIS OF ASP-1080, AND DNA-BINDING.
RX   PubMed=27644322; DOI=10.7554/elife.18227;
RA   Wilkinson M., Chaban Y., Wigley D.B.;
RT   "Mechanism for nuclease regulation in RecBCD.";
RL   Elife 5:0-0(2016).
RN   [38] {ECO:0007744|PDB:5MBV}
RP   STRUCTURE BY ELECTRON MICROSCOPY (3.80 ANGSTROMS) OF RECBCD IN COMPLEX WITH
RP   LAMBDA GAMS PROTEIN.
RX   PubMed=28009252; DOI=10.7554/elife.22963;
RA   Wilkinson M., Troman L., Wan Nur Ismah W.A., Chaban Y., Avison M.B.,
RA   Dillingham M.S., Wigley D.B.;
RT   "Structural basis for the inhibition of RecBCD by Gam and its synergistic
RT   antibacterial effect with quinolones.";
RL   Elife 5:0-0(2016).
RN   [39]
RP   REVIEW.
RX   PubMed=19052323; DOI=10.1128/mmbr.00020-08;
RA   Dillingham M.S., Kowalczykowski S.C.;
RT   "RecBCD enzyme and the repair of double-stranded DNA breaks.";
RL   Microbiol. Mol. Biol. Rev. 72:642-671(2008).
RN   [40]
RP   REVIEW.
RX   PubMed=22688812; DOI=10.1128/mmbr.05026-11;
RA   Smith G.R.;
RT   "How RecBCD enzyme and Chi promote DNA break repair and recombination: a
RT   molecular biologist's view.";
RL   Microbiol. Mol. Biol. Rev. 76:217-228(2012).
CC   -!- FUNCTION: A helicase/nuclease that prepares dsDNA breaks (DSB) for
CC       recombinational DNA repair. Binds to DSBs and unwinds DNA via a rapid
CC       (>1 kb/second) and highly processive (>30 kb) ATP-dependent
CC       bidirectional helicase. Unwinds dsDNA until it encounters a Chi
CC       (crossover hotspot instigator, 5'-GCTGGTGG-3') sequence from the 3'
CC       direction. Cuts ssDNA a few nucleotides 3' to Chi site, by nicking one
CC       strand or switching the strand degraded (depending on the reaction
CC       conditions). The properties and activities of the enzyme are changed at
CC       Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang which
CC       facilitates RecA-binding to the ssDNA for homologous DNA recombination
CC       and repair. Holoenzyme degrades any linearized DNA that is unable to
CC       undergo homologous recombination (PubMed:4562392, PubMed:4552016,
CC       PubMed:123277). In the holoenzyme this subunit contributes ATPase, 3'-
CC       5' helicase, exonuclease activity and loads RecA onto ssDNA. The RecBC
CC       complex requires the RecD subunit for nuclease activity, but can
CC       translocate along ssDNA in both directions. Probably interacts with a
CC       component of retron Ec48 which moniters RecBCD stability; when RecB is
CC       missing or impaired the retron is activated and becomes toxic
CC       (Probable). {ECO:0000269|PubMed:10197988, ECO:0000269|PubMed:10518611,
CC       ECO:0000269|PubMed:10766864, ECO:0000269|PubMed:123277,
CC       ECO:0000269|PubMed:12815437, ECO:0000269|PubMed:12815438,
CC       ECO:0000269|PubMed:1535156, ECO:0000269|PubMed:16041061,
CC       ECO:0000269|PubMed:1618858, ECO:0000269|PubMed:16388588,
CC       ECO:0000269|PubMed:18079176, ECO:0000269|PubMed:20852646,
CC       ECO:0000269|PubMed:23851395, ECO:0000269|PubMed:25073102,
CC       ECO:0000269|PubMed:4268693, ECO:0000269|PubMed:4552016,
CC       ECO:0000269|PubMed:4562392, ECO:0000269|PubMed:7608206,
CC       ECO:0000269|PubMed:9192629, ECO:0000269|PubMed:9230304,
CC       ECO:0000269|PubMed:9448271, ECO:0000269|PubMed:9790841,
CC       ECO:0000305|PubMed:33157039}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Exonucleolytic cleavage (in the presence of ATP) in either
CC         5'- to 3'- or 3'- to 5'-direction to yield 5'-
CC         phosphooligonucleotides.; EC=3.1.11.5; Evidence={ECO:0000255|HAMAP-
CC         Rule:MF_01485};
CC   -!- COFACTOR:
CC       Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_01485,
CC         ECO:0000269|PubMed:15538360, ECO:0000269|PubMed:16388588,
CC         ECO:0000269|PubMed:18668125};
CC       Note=Magnesium is required for both helicase and nuclease activity; its
CC       relative concentration alters helicase speed and nuclease activity in a
CC       complicated fashion. {ECO:0000255|HAMAP-Rule:MF_01485,
CC       ECO:0000269|PubMed:15538360, ECO:0000269|PubMed:16388588,
CC       ECO:0000269|PubMed:18668125};
CC   -!- ACTIVITY REGULATION: After reacting with DNA bearing a Chi site the
CC       holoenzyme is disassembled and loses exonuclease activity, DNA
CC       unwinding and Chi-directed DNA cleavage; RecB remains complexed with
CC       ssDNA, which may prevent holoenzyme reassembly (PubMed:10197988). High
CC       levels of Mg(2+) (13 mM MgCl(2+)) or incubation with DNase allow
CC       holoenyzme reassembly, suggesting it is DNA bound to RecB that prevents
CC       reassembly (PubMed:10197988). {ECO:0000269|PubMed:10197988,
CC       ECO:0000269|PubMed:1535156}.
CC   -!- ACTIVITY REGULATION: (Microbial infection) RecBCD is inhibited by the
CC       lambda virus gam protein (both GamL and GamS isoforms); in vitro a
CC       short preincubation prior to adding DNA results in maximal inhibition.
CC       {ECO:0000269|PubMed:1653221, ECO:0000269|PubMed:4275917}.
CC   -!- SUBUNIT: Heterotrimer of RecB, RecC and RecD. All subunits contribute
CC       to DNA-binding. The C-terminus interacts with RecA (PubMed:16483938).
CC       Interacts with YgbT (Cas1) (PubMed:21219465).
CC       {ECO:0000269|PubMed:15538360, ECO:0000269|PubMed:1618858,
CC       ECO:0000269|PubMed:16483938, ECO:0000269|PubMed:18668125,
CC       ECO:0000269|PubMed:21219465, ECO:0000269|PubMed:3526335,
CC       ECO:0000269|PubMed:4552016, ECO:0000269|PubMed:9448271}.
CC   -!- SUBUNIT: (Microbial infection) Lambda virus GamS protein interacts with
CC       the enzyme without displacing any of the subunits.
CC       {ECO:0000269|PubMed:1653221}.
CC   -!- DOMAIN: The N-terminal DNA-binding domain (residues 1-929) is a ssDNA-
CC       dependent ATPase and has ATP-dependent 3'-5' helicase function; both
CC       are stimulated in the presence of RecC, suggesting this domain
CC       interacts with RecC. Holoenzyme reconstituted with this RecB N-terminal
CC       fragment has no nuclease activity (PubMed:9448271). The C-terminal
CC       domain (residues 928-1180) has weak ssDNA endonuclease activity as an
CC       isolated fragment (PubMed:9790841) (PubMed:10518611). RecD probably
CC       interacts with this domain. The C-terminal domain interacts with RecA,
CC       facilitating its loading onto ssDNA. Interaction is decreased by ATP
CC       (PubMed:16483938). The RecB helicase domains change conformation upon
CC       nucleotide binding. As ssDNA is unwound and fed to the RecD subunit the
CC       latter transmits conformational changes through each subunit to
CC       activate the RecB nuclease (PubMed:15538360).
CC       {ECO:0000269|PubMed:10518611, ECO:0000269|PubMed:15538360,
CC       ECO:0000269|PubMed:16483938, ECO:0000269|PubMed:9448271,
CC       ECO:0000269|PubMed:9790841}.
CC   -!- DOMAIN: The holoenzyme may undergo conformational shifts upon DNA
CC       binding: the nuclease domain of RecB may swing away from the DNA exit
CC       tunnel in RecC. When Chi DNA binds to the RecC tunnel, the nuclease
CC       domain may then swing back to its original position (that seen in
CC       crystal structures), allowing it to nick the DNA 3' of the Chi site and
CC       then rotate to load RecA. At high Mg(2+) the nuclease domain may swing
CC       back more frequently, explaining differences seen in assays performed
CC       at high Mg(2+). {ECO:0000269|PubMed:25073102}.
CC   -!- DISRUPTION PHENOTYPE: Decreased degradation of DNA with free ends that
CC       is unable to undergo homologous recombination, which can fortuitously
CC       lead to more efficient viral infection (PubMed:4562392, PubMed:123277).
CC       Cells are deficient in DNA recombination repair and have increased
CC       sensitivity to UV light. The cultures have many inviable cells
CC       (PubMed:6389498). Cells cannot be transformed with retron Ec48-
CC       containing plasmids (PubMed:33157039). {ECO:0000269|PubMed:123277,
CC       ECO:0000269|PubMed:33157039, ECO:0000269|PubMed:4562392,
CC       ECO:0000269|PubMed:6389498}.
CC   -!- SIMILARITY: Belongs to the helicase family. UvrD subfamily.
CC       {ECO:0000255|HAMAP-Rule:MF_01485}.
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DR   EMBL; X04581; CAA28250.1; -; Genomic_DNA.
DR   EMBL; AF179304; AAD56369.1; -; Genomic_DNA.
DR   EMBL; U29581; AAB40467.1; -; Genomic_DNA.
DR   EMBL; U00096; AAC75859.1; -; Genomic_DNA.
DR   EMBL; AP009048; BAE76889.1; -; Genomic_DNA.
DR   EMBL; X06227; CAA29577.1; -; Genomic_DNA.
DR   EMBL; X04582; CAA28252.1; -; Genomic_DNA.
DR   PIR; A25532; NCECX5.
DR   RefSeq; NP_417297.1; NC_000913.3.
DR   RefSeq; WP_001285993.1; NZ_LN832404.1.
DR   PDB; 1W36; X-ray; 3.10 A; B/E=1-1180.
DR   PDB; 3K70; X-ray; 3.59 A; B/E=1-1180.
DR   PDB; 5LD2; EM; 3.83 A; B=1-1180.
DR   PDB; 5MBV; EM; 3.80 A; B=1-1180.
DR   PDB; 6SJB; EM; 3.70 A; B=1-1180.
DR   PDB; 6SJE; EM; 4.10 A; B=1-1180.
DR   PDB; 6SJF; EM; 3.90 A; B=1-1180.
DR   PDB; 6SJG; EM; 3.80 A; B=1-1180.
DR   PDB; 6T2U; EM; 3.60 A; B=1-1180.
DR   PDB; 6T2V; EM; 3.80 A; B=1-1180.
DR   PDB; 7MR0; EM; 3.70 A; B=1-1180.
DR   PDB; 7MR1; EM; 4.20 A; B=1-1180.
DR   PDB; 7MR2; EM; 4.30 A; B=1-1180.
DR   PDB; 7MR3; EM; 3.60 A; B=1-1180.
DR   PDB; 7MR4; EM; 4.50 A; B=1-1180.
DR   PDBsum; 1W36; -.
DR   PDBsum; 3K70; -.
DR   PDBsum; 5LD2; -.
DR   PDBsum; 5MBV; -.
DR   PDBsum; 6SJB; -.
DR   PDBsum; 6SJE; -.
DR   PDBsum; 6SJF; -.
DR   PDBsum; 6SJG; -.
DR   PDBsum; 6T2U; -.
DR   PDBsum; 6T2V; -.
DR   PDBsum; 7MR0; -.
DR   PDBsum; 7MR1; -.
DR   PDBsum; 7MR2; -.
DR   PDBsum; 7MR3; -.
DR   PDBsum; 7MR4; -.
DR   AlphaFoldDB; P08394; -.
DR   SMR; P08394; -.
DR   BioGRID; 4262307; 585.
DR   BioGRID; 851614; 3.
DR   ComplexPortal; CPX-2197; Exodeoxyribonuclease V complex.
DR   DIP; DIP-540N; -.
DR   IntAct; P08394; 20.
DR   MINT; P08394; -.
DR   STRING; 511145.b2820; -.
DR   ChEMBL; CHEMBL2095232; -.
DR   jPOST; P08394; -.
DR   PaxDb; P08394; -.
DR   PRIDE; P08394; -.
DR   EnsemblBacteria; AAC75859; AAC75859; b2820.
DR   EnsemblBacteria; BAE76889; BAE76889; BAE76889.
DR   GeneID; 947286; -.
DR   KEGG; ecj:JW2788; -.
DR   KEGG; eco:b2820; -.
DR   PATRIC; fig|1411691.4.peg.3916; -.
DR   EchoBASE; EB0817; -.
DR   eggNOG; COG1074; Bacteria.
DR   HOGENOM; CLU_001114_6_0_6; -.
DR   InParanoid; P08394; -.
DR   OMA; KQSIYRW; -.
DR   PhylomeDB; P08394; -.
DR   BioCyc; EcoCyc:EG10824-MON; -.
DR   BioCyc; MetaCyc:EG10824-MON; -.
DR   BRENDA; 3.1.11.5; 2026.
DR   EvolutionaryTrace; P08394; -.
DR   PRO; PR:P08394; -.
DR   Proteomes; UP000000318; Chromosome.
DR   Proteomes; UP000000625; Chromosome.
DR   GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR   GO; GO:0009338; C:exodeoxyribonuclease V complex; IDA:EcoCyc.
DR   GO; GO:0043138; F:3'-5' DNA helicase activity; IBA:GO_Central.
DR   GO; GO:0005524; F:ATP binding; IDA:EcoCyc.
DR   GO; GO:0008094; F:ATP-dependent activity, acting on DNA; IDA:EcoCyc.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003678; F:DNA helicase activity; IDA:EcoCyc.
DR   GO; GO:0015616; F:DNA translocase activity; IDA:EcoCyc.
DR   GO; GO:0004520; F:endodeoxyribonuclease activity; IDA:EcoCyc.
DR   GO; GO:0008854; F:exodeoxyribonuclease V activity; IDA:EcoCyc.
DR   GO; GO:0000287; F:magnesium ion binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0044355; P:clearance of foreign intracellular DNA; IMP:UniProtKB.
DR   GO; GO:0006310; P:DNA recombination; IDA:EcoCyc.
DR   GO; GO:0000724; P:double-strand break repair via homologous recombination; TAS:EcoCyc.
DR   GO; GO:0000725; P:recombinational repair; IDA:ComplexPortal.
DR   GO; GO:0009314; P:response to radiation; IMP:EcoCyc.
DR   Gene3D; 3.40.50.300; -; 2.
DR   Gene3D; 3.90.320.10; -; 1.
DR   HAMAP; MF_01485; RecB; 1.
DR   InterPro; IPR014017; DNA_helicase_UvrD-like_C.
DR   InterPro; IPR000212; DNA_helicase_UvrD/REP.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR011604; PDDEXK-like_dom_sf.
DR   InterPro; IPR038726; PDDEXK_AddAB-type.
DR   InterPro; IPR004586; RecB.
DR   InterPro; IPR011335; Restrct_endonuc-II-like.
DR   InterPro; IPR014016; UvrD-like_ATP-bd.
DR   PANTHER; PTHR11070; PTHR11070; 1.
DR   PANTHER; PTHR11070:SF23; PTHR11070:SF23; 1.
DR   Pfam; PF12705; PDDEXK_1; 1.
DR   Pfam; PF00580; UvrD-helicase; 1.
DR   Pfam; PF13361; UvrD_C; 2.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   SUPFAM; SSF52980; SSF52980; 1.
DR   TIGRFAMs; TIGR00609; recB; 1.
DR   PROSITE; PS51198; UVRD_HELICASE_ATP_BIND; 1.
DR   PROSITE; PS51217; UVRD_HELICASE_CTER; 1.
PE   1: Evidence at protein level;
KW   3D-structure; ATP-binding; Direct protein sequencing; DNA damage;
KW   DNA repair; DNA-binding; Exonuclease; Helicase; Hydrolase; Magnesium;
KW   Metal-binding; Nuclease; Nucleotide-binding; Reference proteome.
FT   INIT_MET        1
FT                   /note="Removed"
FT                   /evidence="ECO:0000269|PubMed:1618858"
FT   CHAIN           2..1180
FT                   /note="RecBCD enzyme subunit RecB"
FT                   /id="PRO_0000102046"
FT   DOMAIN          2..450
FT                   /note="UvrD-like helicase ATP-binding"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01485"
FT   DOMAIN          480..746
FT                   /note="UvrD-like helicase C-terminal"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01485"
FT   DNA_BIND        252..254
FT   DNA_BIND        511..512
FT   DNA_BIND        560..561
FT   DNA_BIND        761
FT   REGION          2..927
FT                   /note="ATPase, DNA-binding and helicase activity, interacts
FT                   with RecC"
FT   REGION          928..1180
FT                   /note="Nuclease activity, interacts with RecD and RecA"
FT   ACT_SITE        1080
FT                   /note="For nuclease activity"
FT                   /evidence="ECO:0000269|PubMed:10518611,
FT                   ECO:0000269|PubMed:9790841"
FT   BINDING         23..30
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000269|PubMed:15538360"
FT   BINDING         447
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000269|PubMed:15538360"
FT   BINDING         956
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /evidence="ECO:0000305|PubMed:15538360,
FT                   ECO:0000305|PubMed:18668125"
FT   BINDING         1067
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /evidence="ECO:0000305|PubMed:15538360,
FT                   ECO:0000305|PubMed:18668125"
FT   BINDING         1080
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /evidence="ECO:0000305|PubMed:15538360,
FT                   ECO:0000305|PubMed:18668125"
FT   BINDING         1081
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /evidence="ECO:0000305|PubMed:15538360,
FT                   ECO:0000305|PubMed:18668125"
FT   MUTAGEN         29
FT                   /note="K->Q: Subunit loses ATPase and 3'-5' helicase
FT                   activity, holoenzyme has 3-5 fold less helicase activity,
FT                   20-fold less processivity."
FT                   /evidence="ECO:0000269|PubMed:12815437,
FT                   ECO:0000269|PubMed:16041061, ECO:0000269|PubMed:23851395"
FT   MUTAGEN         803
FT                   /note="Y->H: Large decrease in recombination, loss of Chi
FT                   hotspot activity, decreased RecB helicase rate, retains
FT                   nuclease activity but not Chi-sequence specificity, does
FT                   not load RecA."
FT                   /evidence="ECO:0000269|PubMed:18079176"
FT   MUTAGEN         804
FT                   /note="V->E: Large decrease in recombination, loss of Chi
FT                   hotspot activity, decreased RecB helicase rate, retains
FT                   nuclease activity but not Chi-sequence specificity, does
FT                   not load RecA."
FT                   /evidence="ECO:0000269|PubMed:18079176"
FT   MUTAGEN         807
FT                   /note="T->I: In recB-2109; absence of nuclease modification
FT                   at Chi sites."
FT                   /evidence="ECO:0000269|PubMed:10766864"
FT   MUTAGEN         1067
FT                   /note="D->A: Subunit loses nuclease activity."
FT                   /evidence="ECO:0000269|PubMed:16388588"
FT   MUTAGEN         1080
FT                   /note="D->A: Loss of holoenzyme nuclease activity, retains
FT                   full helicase activity, does not act at Chi, no loading of
FT                   RecA on ssDNA and no recombinational repair."
FT                   /evidence="ECO:0000269|PubMed:10518611,
FT                   ECO:0000269|PubMed:16388588, ECO:0000269|PubMed:27644322,
FT                   ECO:0000269|PubMed:9790841"
FT   HELIX           10..12
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          19..22
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           29..41
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          45..49
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           56..58
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          59..64
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           66..88
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           95..103
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           107..120
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           121..123
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          125..128
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           129..139
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           141..144
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           157..172
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           177..186
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           190..197
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   TURN            198..201
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          202..204
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          207..210
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           218..234
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          249..251
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           255..263
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           283..287
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           312..316
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           324..346
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           351..363
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           367..377
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          379..383
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           386..388
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           391..401
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          408..413
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           415..417
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   TURN            421..424
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           427..436
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          440..442
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           451..462
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          463..466
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           482..484
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          487..491
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          494..496
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          498..503
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           513..534
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          538..542
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          545..548
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           551..553
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          554..560
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           561..572
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   TURN            573..575
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          578..580
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           587..589
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           592..603
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           609..617
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           619..621
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           625..633
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           635..655
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           657..667
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           670..676
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          677..679
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           680..698
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           704..716
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           732..734
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          735..740
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   TURN            741..744
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          749..754
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   TURN            755..758
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          767..769
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   TURN            771..773
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          776..781
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           784..806
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          809..817
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           832..835
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           837..842
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           850..859
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          865..869
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          901..906
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          908..910
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           917..920
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           942..944
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           949..958
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          964..966
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           970..979
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           984..986
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           987..998
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          1002..1006
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           1009..1011
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           1014..1016
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          1017..1027
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           1033..1043
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          1059..1074
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          1079..1082
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           1090..1092
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           1095..1104
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   TURN            1105..1107
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           1108..1125
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          1126..1128
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           1131..1134
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   STRAND          1139..1145
FT                   /evidence="ECO:0007829|PDB:1W36"
FT   HELIX           1164..1173
FT                   /evidence="ECO:0007829|PDB:1W36"
SQ   SEQUENCE   1180 AA;  133959 MW;  F9AC331808E8F281 CRC64;
     MSDVAETLDP LRLPLQGERL IEASAGTGKT FTIAALYLRL LLGLGGSAAF PRPLTVEELL
     VVTFTEAATA ELRGRIRSNI HELRIACLRE TTDNPLYERL LEEIDDKAQA AQWLLLAERQ
     MDEAAVFTIH GFCQRMLNLN AFESGMLFEQ QLIEDESLLR YQACADFWRR HCYPLPREIA
     QVVFETWKGP QALLRDINRY LQGEAPVIKA PPPDDETLAS RHAQIVARID TVKQQWRDAV
     GELDALIESS GIDRRKFNRS NQAKWIDKIS AWAEEETNSY QLPESLEKFS QRFLEDRTKA
     GGETPRHPLF EAIDQLLAEP LSIRDLVITR ALAEIRETVA REKRRRGELG FDDMLSRLDS
     ALRSESGEVL AAAIRTRFPV AMIDEFQDTD PQQYRIFRRI WHHQPETALL LIGDPKQAIY
     AFRGADIFTY MKARSEVHAH YTLDTNWRSA PGMVNSVNKL FSQTDDAFMF REIPFIPVKS
     AGKNQALRFV FKGETQPAMK MWLMEGESCG VGDYQSTMAQ VCAAQIRDWL QAGQRGEALL
     MNGDDARPVR ASDISVLVRS RQEAAQVRDA LTLLEIPSVY LSNRDSVFET LEAQEMLWLL
     QAVMTPEREN TLRSALATSM MGLNALDIET LNNDEHAWDV VVEEFDGYRQ IWRKRGVMPM
     LRALMSARNI AENLLATAGG ERRLTDILHI SELLQEAGTQ LESEHALVRW LSQHILEPDS
     NASSQQMRLE SDKHLVQIVT IHKSKGLEYP LVWLPFITNF RVQEQAFYHD RHSFEAVLDL
     NAAPESVDLA EAERLAEDLR LLYVALTRSV WHCSLGVAPL VRRRGDKKGD TDVHQSALGR
     LLQKGEPQDA AGLRTCIEAL CDDDIAWQTA QTGDNQPWQV NDVSTAELNA KTLQRLPGDN
     WRVTSYSGLQ QRGHGIAQDL MPRLDVDAAG VASVVEEPTL TPHQFPRGAS PGTFLHSLFE
     DLDFTQPVDP NWVREKLELG GFESQWEPVL TEWITAVLQA PLNETGVSLS QLSARNKQVE
     MEFYLPISEP LIASQLDTLI RQFDPLSAGC PPLEFMQVRG MLKGFIDLVF RHEGRYYLLD
     YKSNWLGEDS SAYTQQAMAA AMQAHRYDLQ YQLYTLALHR YLRHRIADYD YEHHFGGVIY
     LFLRGVDKEH PQQGIYTTRP NAGLIALMDE MFAGMTLEEA
 
 
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