RECF_CLOD6
ID RECF_CLOD6 Reviewed; 371 AA.
AC Q18C86;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 25-JUL-2006, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=DNA replication and repair protein RecF {ECO:0000255|HAMAP-Rule:MF_00365};
GN Name=recF {ECO:0000255|HAMAP-Rule:MF_00365}; OrderedLocusNames=CD630_00040;
OS Clostridioides difficile (strain 630) (Peptoclostridium difficile).
OC Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptostreptococcaceae;
OC Clostridioides.
OX NCBI_TaxID=272563;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=630;
RX PubMed=16804543; DOI=10.1038/ng1830;
RA Sebaihia M., Wren B.W., Mullany P., Fairweather N.F., Minton N.,
RA Stabler R., Thomson N.R., Roberts A.P., Cerdeno-Tarraga A.M., Wang H.,
RA Holden M.T.G., Wright A., Churcher C., Quail M.A., Baker S., Bason N.,
RA Brooks K., Chillingworth T., Cronin A., Davis P., Dowd L., Fraser A.,
RA Feltwell T., Hance Z., Holroyd S., Jagels K., Moule S., Mungall K.,
RA Price C., Rabbinowitsch E., Sharp S., Simmonds M., Stevens K., Unwin L.,
RA Whithead S., Dupuy B., Dougan G., Barrell B., Parkhill J.;
RT "The multidrug-resistant human pathogen Clostridium difficile has a highly
RT mobile, mosaic genome.";
RL Nat. Genet. 38:779-786(2006).
CC -!- FUNCTION: The RecF protein is involved in DNA metabolism; it is
CC required for DNA replication and normal SOS inducibility. RecF binds
CC preferentially to single-stranded, linear DNA. It also seems to bind
CC ATP. {ECO:0000255|HAMAP-Rule:MF_00365}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00365}.
CC -!- SIMILARITY: Belongs to the RecF family. {ECO:0000255|HAMAP-
CC Rule:MF_00365}.
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DR EMBL; AM180355; CAJ66818.1; -; Genomic_DNA.
DR RefSeq; WP_003429303.1; NZ_CP010905.2.
DR RefSeq; YP_001086467.1; NC_009089.1.
DR AlphaFoldDB; Q18C86; -.
DR SMR; Q18C86; -.
DR STRING; 272563.CD630_00040; -.
DR EnsemblBacteria; CAJ66818; CAJ66818; CD630_00040.
DR GeneID; 66352442; -.
DR KEGG; cdf:CD630_00040; -.
DR KEGG; pdc:CDIF630_00004; -.
DR PATRIC; fig|272563.120.peg.4; -.
DR eggNOG; COG1195; Bacteria.
DR OMA; GESWSYA; -.
DR PhylomeDB; Q18C86; -.
DR BioCyc; PDIF272563:G12WB-4-MON; -.
DR Proteomes; UP000001978; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003697; F:single-stranded DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-UniRule.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-UniRule.
DR GO; GO:0009432; P:SOS response; IEA:UniProtKB-UniRule.
DR Gene3D; 1.20.1050.90; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00365; RecF; 1.
DR InterPro; IPR001238; DNA-binding_RecF.
DR InterPro; IPR018078; DNA-binding_RecF_CS.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR003395; RecF/RecN/SMC_N.
DR InterPro; IPR042174; RecF_2.
DR PANTHER; PTHR32182:SF0; PTHR32182:SF0; 1.
DR Pfam; PF02463; SMC_N; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00611; recf; 1.
DR PROSITE; PS00617; RECF_1; 1.
DR PROSITE; PS00618; RECF_2; 1.
PE 3: Inferred from homology;
KW ATP-binding; Cytoplasm; DNA damage; DNA repair; DNA replication;
KW DNA-binding; Nucleotide-binding; Reference proteome; SOS response.
FT CHAIN 1..371
FT /note="DNA replication and repair protein RecF"
FT /id="PRO_1000048512"
FT BINDING 30..37
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00365"
SQ SEQUENCE 371 AA; 42916 MW; 2AB3C01BB1E11790 CRC64;
MKLKSLQLVN FRNYKKLHLE FNGKVNLLVG KNGQGKTNIV ESIYMLSFGK SFRTNKDKEM
VRFNSENLYI GGSFSKYNKY SLIELIIGKD KKGIRINKVP LQKIQELLGN LNVVIFSPED
LRLVKEGPKE RRAFIDKEIS QIIPKYYKYL TNYNKTLSQR SRVLKNIHVD EALLDVYDDT
LAKYGSYIYI LRRDFIKKIA NISENMHMNL TNGVERLSIR YKNQINITDE DTIDTVYNKF
LAKLSSNRPN DIESKTTRYG IHKDDLNIFI NDLDARLFGS QGQQRTASIS LKLSEIELIK
NEVEEYPVLI LDDVFSELDE ARQKLLVNNL SNVQMFITSA EVSHKKIFDE KNVTIFNIEN
GDVISIENGG N