RECF_VIBCH
ID RECF_VIBCH Reviewed; 363 AA.
AC Q9KVX4;
DT 04-MAY-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 113.
DE RecName: Full=DNA replication and repair protein RecF;
GN Name=recF; OrderedLocusNames=VC_0014;
OS Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=243277;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 39315 / El Tor Inaba N16961;
RX PubMed=10952301; DOI=10.1038/35020000;
RA Heidelberg J.F., Eisen J.A., Nelson W.C., Clayton R.A., Gwinn M.L.,
RA Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Umayam L.A., Gill S.R.,
RA Nelson K.E., Read T.D., Tettelin H., Richardson D.L., Ermolaeva M.D.,
RA Vamathevan J.J., Bass S., Qin H., Dragoi I., Sellers P., McDonald L.A.,
RA Utterback T.R., Fleischmann R.D., Nierman W.C., White O., Salzberg S.L.,
RA Smith H.O., Colwell R.R., Mekalanos J.J., Venter J.C., Fraser C.M.;
RT "DNA sequence of both chromosomes of the cholera pathogen Vibrio
RT cholerae.";
RL Nature 406:477-483(2000).
CC -!- FUNCTION: The RecF protein is involved in DNA metabolism; it is
CC required for DNA replication and normal SOS inducibility. RecF binds
CC preferentially to single-stranded, linear DNA. It also seems to bind
CC ATP (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the RecF family. {ECO:0000305}.
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DR EMBL; AE003852; AAF93192.1; -; Genomic_DNA.
DR PIR; G82376; G82376.
DR RefSeq; NP_062598.1; NC_002505.1.
DR RefSeq; WP_001884355.1; NZ_LT906614.1.
DR AlphaFoldDB; Q9KVX4; -.
DR SMR; Q9KVX4; -.
DR STRING; 243277.VC_0014; -.
DR DNASU; 2615704; -.
DR EnsemblBacteria; AAF93192; AAF93192; VC_0014.
DR KEGG; vch:VC_0014; -.
DR PATRIC; fig|243277.26.peg.13; -.
DR eggNOG; COG1195; Bacteria.
DR HOGENOM; CLU_040267_0_0_6; -.
DR OMA; GESWSYA; -.
DR BioCyc; VCHO:VC0014-MON; -.
DR Proteomes; UP000000584; Chromosome 1.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003697; F:single-stranded DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-UniRule.
DR GO; GO:0000731; P:DNA synthesis involved in DNA repair; IBA:GO_Central.
DR GO; GO:0006302; P:double-strand break repair; IBA:GO_Central.
DR GO; GO:0009432; P:SOS response; IEA:UniProtKB-UniRule.
DR Gene3D; 1.20.1050.90; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00365; RecF; 1.
DR InterPro; IPR001238; DNA-binding_RecF.
DR InterPro; IPR018078; DNA-binding_RecF_CS.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR003395; RecF/RecN/SMC_N.
DR InterPro; IPR042174; RecF_2.
DR PANTHER; PTHR32182:SF0; PTHR32182:SF0; 1.
DR Pfam; PF02463; SMC_N; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00611; recf; 1.
DR PROSITE; PS00617; RECF_1; 1.
DR PROSITE; PS00618; RECF_2; 1.
PE 3: Inferred from homology;
KW ATP-binding; Cytoplasm; DNA damage; DNA repair; DNA replication;
KW DNA-binding; Nucleotide-binding; Reference proteome; SOS response.
FT CHAIN 1..363
FT /note="DNA replication and repair protein RecF"
FT /id="PRO_0000196485"
FT BINDING 30..37
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
SQ SEQUENCE 363 AA; 41220 MW; B3A30D964DD829C5 CRC64;
MPLSRLMIQQ FRNIKACDIR LSAGFNFLIG PNGSGKTSVL EAIYLLGHGR SFKSSLTGRI
IQNECSELFV HGRICEHSLS SDQFELPVGI NKQRDGSTEV KIGGQTGQKL AQLAQILPLQ
LIHPEGFELL TDGPKQRRAF IDWGVFHTEP AFFDAWGRFK RLSKQRNALL KSAQSYRELS
YWDQELARLA EQIDQWRESY VNQLKNVAEQ LCRTFLPEFD IDLKYYRGWE KDQPYQSILE
KNFERDQQLG YTFSGPNKAD LRIKVNATPV EDVLSRGQLK LMVCALRVAQ GQHLTELTGK
QCIYLIDDFA SELDSLRRQR LADSLKGTGA QVFVSSITES QVADMLDESS KTFHVAHGVI
EQG