REG6_PYRAB
ID REG6_PYRAB Reviewed; 151 AA.
AC Q9V0Y9; G8ZJA7;
DT 26-SEP-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 130.
DE RecName: Full=HTH-type transcriptional regulator FL11 {ECO:0000250|UniProtKB:O59188};
DE AltName: Full=Feast/famine regulatory protein FL11 {ECO:0000250|UniProtKB:O59188};
DE Short=FFRP FL11 {ECO:0000250|UniProtKB:O59188};
GN Name=fl11 {ECO:0000250|UniProtKB:O59188}; OrderedLocusNames=PYRAB06490;
GN ORFNames=PAB1938;
OS Pyrococcus abyssi (strain GE5 / Orsay).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Pyrococcus.
OX NCBI_TaxID=272844;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GE5 / Orsay;
RX PubMed=12622808; DOI=10.1046/j.1365-2958.2003.03381.x;
RA Cohen G.N., Barbe V., Flament D., Galperin M., Heilig R., Lecompte O.,
RA Poch O., Prieur D., Querellou J., Ripp R., Thierry J.-C., Van der Oost J.,
RA Weissenbach J., Zivanovic Y., Forterre P.;
RT "An integrated analysis of the genome of the hyperthermophilic archaeon
RT Pyrococcus abyssi.";
RL Mol. Microbiol. 47:1495-1512(2003).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=GE5 / Orsay;
RX PubMed=22057919; DOI=10.1007/s00284-011-0035-x;
RA Gao J., Wang J.;
RT "Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and
RT Pyrococcus furiosus DSM 3638.";
RL Curr. Microbiol. 64:118-129(2012).
CC -!- FUNCTION: DNA-binding protein involved in the repression of
CC transcription of a large number of genes, thereby arresting growth, in
CC response to environmental changes. {ECO:0000250|UniProtKB:O59188}.
CC -!- ACTIVITY REGULATION: In the famine mode, FL11 forms dimers and acts as
CC a repressor, leading to growth arrest. In the feast mode, in the
CC presence of high concentrations of lysine or arginine, four dimers
CC assemble into an octamer and cover the fl11 and lysine biosynthesis
CC promoters. This leads to the inhibition of fl11 expression and lysine
CC biosynthesis, decrease of the FL11 concentration in the cell,
CC derepression of the target genes and activation of the metabolism.
CC {ECO:0000250|UniProtKB:O59188}.
CC -!- SUBUNIT: Homodimer. Binds DNA as a dimer and an octamer.
CC {ECO:0000250|UniProtKB:O59188}.
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DR EMBL; AJ248285; CAB49562.1; -; Genomic_DNA.
DR EMBL; HE613800; CCE70034.1; -; Genomic_DNA.
DR PIR; A75106; A75106.
DR RefSeq; WP_010867764.1; NC_000868.1.
DR AlphaFoldDB; Q9V0Y9; -.
DR SMR; Q9V0Y9; -.
DR STRING; 272844.PAB1938; -.
DR EnsemblBacteria; CAB49562; CAB49562; PAB1938.
DR GeneID; 1495547; -.
DR KEGG; pab:PAB1938; -.
DR PATRIC; fig|272844.11.peg.680; -.
DR eggNOG; arCOG01580; Archaea.
DR HOGENOM; CLU_091233_5_4_2; -.
DR OMA; AGDENYI; -.
DR OrthoDB; 97695at2157; -.
DR PhylomeDB; Q9V0Y9; -.
DR Proteomes; UP000000810; Chromosome.
DR Proteomes; UP000009139; Chromosome.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR CDD; cd00090; HTH_ARSR; 1.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR011991; ArsR-like_HTH.
DR InterPro; IPR000485; AsnC-type_HTH_dom.
DR InterPro; IPR011008; Dimeric_a/b-barrel.
DR InterPro; IPR019888; Tscrpt_reg_AsnC-like.
DR InterPro; IPR019887; Tscrpt_reg_AsnC/Lrp_C.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR Pfam; PF01037; AsnC_trans_reg; 1.
DR Pfam; PF13404; HTH_AsnC-type; 1.
DR PRINTS; PR00033; HTHASNC.
DR SMART; SM00344; HTH_ASNC; 1.
DR SUPFAM; SSF46785; SSF46785; 1.
DR SUPFAM; SSF54909; SSF54909; 1.
DR PROSITE; PS50956; HTH_ASNC_2; 1.
PE 3: Inferred from homology;
KW DNA-binding; Repressor; Stress response; Transcription;
KW Transcription regulation.
FT CHAIN 1..151
FT /note="HTH-type transcriptional regulator FL11"
FT /id="PRO_0000111767"
FT DOMAIN 5..66
FT /note="HTH asnC-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00319"
FT DNA_BIND 24..43
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00319"
FT BINDING 98..104
FT /ligand="L-arginine"
FT /ligand_id="ChEBI:CHEBI:32682"
FT /evidence="ECO:0000250|UniProtKB:O59188"
FT BINDING 118
FT /ligand="L-lysine"
FT /ligand_id="ChEBI:CHEBI:32551"
FT /evidence="ECO:0000250|UniProtKB:O59188"
FT BINDING 122
FT /ligand="L-arginine"
FT /ligand_id="ChEBI:CHEBI:32682"
FT /evidence="ECO:0000250|UniProtKB:O59188"
FT BINDING 122
FT /ligand="L-lysine"
FT /ligand_id="ChEBI:CHEBI:32551"
FT /evidence="ECO:0000250|UniProtKB:O59188"
FT BINDING 133..135
FT /ligand="L-arginine"
FT /ligand_id="ChEBI:CHEBI:32682"
FT /evidence="ECO:0000250|UniProtKB:O59188"
FT BINDING 133..135
FT /ligand="L-lysine"
FT /ligand_id="ChEBI:CHEBI:32551"
FT /evidence="ECO:0000250|UniProtKB:O59188"
SQ SEQUENCE 151 AA; 17048 MW; 53125F6AD3BC4F77 CRC64;
MRVSLDEIDR RIIKILQKDG KAPLREISKI TGLAESTIHE RIKKLRESGV IRKFTAIVNP
EALGYSMLAF ILIKVKAGKY AEVASNLVKY EEIMEVYETT GDYDMVVKIR TKNSEELNSF
LDVIGSIPGV EGTHTMIVLK THKETTELPI K