REL2_ORYSJ
ID REL2_ORYSJ Reviewed; 767 AA.
AC Q9AQW1; Q7EXK7; Q7XC46;
DT 16-OCT-2019, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 03-AUG-2022, entry version 113.
DE RecName: Full=Protein ROLLING AND ERECT LEAF 2 {ECO:0000303|PubMed:27473144};
GN Name=REL2 {ECO:0000303|PubMed:27473144};
GN OrderedLocusNames=LOC_Os10g41310 {ECO:0000312|EMBL:AAP55028.1},
GN Os10g0562700 {ECO:0000312|EMBL:BAF27232.1};
GN ORFNames=OsJ_32472 {ECO:0000312|EMBL:EAZ16987.1},
GN OSJNBb0089A17.4 {ECO:0000312|EMBL:AAK31266.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA].
RC TISSUE=Ovule;
RA Bi X., Fu B.;
RT "Cloning and characterization of a novel bZIP protein from rice ovule.";
RL Submitted (FEB-2001) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12791992; DOI=10.1126/science.1083523;
RA Yu Y., Rambo T., Currie J., Saski C., Kim H.-R., Collura K., Thompson S.,
RA Simmons J., Yang T.-J., Nah G., Patel A.J., Thurmond S., Henry D.,
RA Oates R., Palmer M., Pries G., Gibson J., Anderson H., Paradkar M.,
RA Crane L., Dale J., Carver M.B., Wood T., Frisch D., Engler F.,
RA Soderlund C., Palmer L.E., Teytelman L., Nascimento L., De la Bastide M.,
RA Spiegel L., Ware D., O'Shaughnessy A., Dike S., Dedhia N., Preston R.,
RA Huang E., Ferraro K., Kuit K., Miller B., Zutavern T., Katzenberger F.,
RA Muller S., Balija V., Martienssen R.A., Stein L., Minx P., Johnson D.,
RA Cordum H., Mardis E., Cheng Z., Jiang J., Wilson R., McCombie W.R.,
RA Wing R.A., Yuan Q., Ouyang S., Liu J., Jones K.M., Gansberger K.,
RA Moffat K., Hill J., Tsitrin T., Overton L., Bera J., Kim M., Jin S.,
RA Tallon L., Ciecko A., Pai G., Van Aken S., Utterback T., Reidmuller S.,
RA Bormann J., Feldblyum T., Hsiao J., Zismann V., Blunt S., de Vazeille A.R.,
RA Shaffer T., Koo H., Suh B., Yang Q., Haas B., Peterson J., Pertea M.,
RA Volfovsky N., Wortman J., White O., Salzberg S.L., Fraser C.M., Buell C.R.,
RA Messing J., Song R., Fuks G., Llaca V., Kovchak S., Young S., Bowers J.E.,
RA Paterson A.H., Johns M.A., Mao L., Pan H., Dean R.A.;
RT "In-depth view of structure, activity, and evolution of rice chromosome
RT 10.";
RL Science 300:1566-1569(2003).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [7]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RG The rice full-length cDNA consortium;
RT "Oryza sativa full length cDNA.";
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN [8]
RP FUNCTION, SUBCELLULAR LOCATION, TISSUE SPECIFICITY, AND DISRUPTION
RP PHENOTYPE.
RX PubMed=27473144; DOI=10.1186/s12284-016-0105-6;
RA Yang S.Q., Li W.Q., Miao H., Gan P.F., Qiao L., Chang Y.L., Shi C.H.,
RA Chen K.M.;
RT "REL2, A Gene Encoding An Unknown Function Protein which Contains DUF630
RT and DUF632 Domains Controls Leaf Rolling in Rice.";
RL Rice 9:37-37(2016).
CC -!- FUNCTION: Involved in the regulation of leaf shape formation
CC (PubMed:27473144). May function by coordinating the expression of genes
CC associated with leaf and bulliform cell development (PubMed:27473144).
CC {ECO:0000269|PubMed:27473144}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000269|PubMed:27473144};
CC Peripheral membrane protein {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Highly expressed in young leaves and panicles
CC (PubMed:27473144). Expressed at low levels in roots (PubMed:27473144).
CC {ECO:0000269|PubMed:27473144}.
CC -!- DISRUPTION PHENOTYPE: Adaxially rolling and erect leaves which leads to
CC plants with erect architecture and reduced lamina joint angle
CC (PubMed:27473144). Abnormal bulliform cell number, size and arrangement
CC in leaf blades (PubMed:27473144). Dark-green leaves with increased
CC levels of chlorophylls (PubMed:27473144). Reduced number of tillers,
CC altered grain morphology, and reduced number of grains per main panicle
CC (PubMed:27473144). Reduced number and length of adventitious roots
CC (PubMed:27473144). {ECO:0000269|PubMed:27473144}.
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DR EMBL; AF268596; AAK01315.2; -; mRNA.
DR EMBL; AY027588; AAK13058.1; -; Genomic_DNA.
DR EMBL; AC079890; AAK31266.1; -; Genomic_DNA.
DR EMBL; DP000086; AAP55028.1; -; Genomic_DNA.
DR EMBL; AP008216; BAF27232.1; -; Genomic_DNA.
DR EMBL; AP014966; BAT12075.1; -; Genomic_DNA.
DR EMBL; CM000147; EAZ16987.1; -; Genomic_DNA.
DR EMBL; AK243456; BAH01606.1; -; mRNA.
DR RefSeq; XP_015612957.1; XM_015757471.1.
DR AlphaFoldDB; Q9AQW1; -.
DR IntAct; Q9AQW1; 7.
DR STRING; 4530.OS10T0562700-01; -.
DR PaxDb; Q9AQW1; -.
DR PRIDE; Q9AQW1; -.
DR EnsemblPlants; Os10t0562700-01; Os10t0562700-01; Os10g0562700.
DR GeneID; 4349394; -.
DR Gramene; Os10t0562700-01; Os10t0562700-01; Os10g0562700.
DR KEGG; osa:4349394; -.
DR eggNOG; ENOG502QU01; Eukaryota.
DR HOGENOM; CLU_010985_5_0_1; -.
DR InParanoid; Q9AQW1; -.
DR OMA; MWKSMNQ; -.
DR OrthoDB; 482517at2759; -.
DR Proteomes; UP000000763; Chromosome 10.
DR Proteomes; UP000007752; Chromosome 10.
DR Proteomes; UP000059680; Chromosome 10.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
DR InterPro; IPR006868; DUF630.
DR InterPro; IPR006867; DUF632.
DR Pfam; PF04783; DUF630; 1.
DR Pfam; PF04782; DUF632; 1.
PE 2: Evidence at transcript level;
KW Cell membrane; Developmental protein; Differentiation; Membrane;
KW Reference proteome.
FT CHAIN 1..767
FT /note="Protein ROLLING AND ERECT LEAF 2"
FT /id="PRO_0000448356"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 78..187
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 201..309
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 80..130
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 148..174
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 201..221
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 222..239
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 240..263
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 767 AA; 85721 MW; C9407E03F58314EB CRC64;
MGCTASKVEQ EDTVRRCKER RRHMKEAVAS RQQLASAHAD YLRSLRLTAA ALSRFAQGHP
SLAVSHHTAP VLLTTAAPAL APTPTPPPPS STASSSLPPP TPLLPKHQQA PPPPPPTQSH
QPPPPVAVRA PRGGPRRLKV PHILSDSSVA SPARSSFRKP VVGTPSSSSA WDWENFYPPS
PPDSEFFDRR KADLEEANRL RELEEEEKAR GYLHPHHLKE EDEVDDDDDE REEEMHCGGW
EDDDDHYAST TTSETRSEEG EMGNRSECGF AARSEYGGTA PSEYAAAPLP LPLRRRDERS
EAGDSSSTVT AAAEMRMVIR HRTLAEIVAA IEEYFVKAAE AGNGVSELLE ASRAQLDRNF
RQLKKTVYHS NSLLSSLSST WTSKPPLAVR YKLDTNALEM ESMEGKSHGS TLERLLAWEK
KLYQEVKARE SVKIEHEKKL STLQSLEYRG RDSTKLDKTK ASINKLQSLI IVTSQAATTT
SSAIVRVRDN ELAPQLVELC FALLSMWRSM NHFHEIQNEI VQQVRGLVDN SMAESTSDLH
RLATRDLEAA VSAWHSNFNR LIKYQRDYIR ALYGWLKLTL FQVDSNIPQE AYTSLISREL
TTFCDEWKQA LDRLPDASAS EAIKSFVNVV HVIYTKQAEE MKIKKRTETY SKELEKKTNS
LRAIEKKYYQ SYSMVGLGLP GSGRDGIESH SFDARDPLAE KKTEIAQCRR KVEDEMTRHA
KAVEVTRSMT LNNIQTGLPG MFQAIAGFSG TVVEALDVVC RRAGSVR
