RELCH_XENTR
ID RELCH_XENTR Reviewed; 1196 AA.
AC Q08BT5;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 31-OCT-2006, sequence version 1.
DT 03-AUG-2022, entry version 64.
DE RecName: Full=RAB11-binding protein RELCH homolog;
DE AltName: Full=LisH domain and HEAT repeat-containing protein KIAA1468;
DE AltName: Full=RAB11-binding protein containing LisH, coiled-coil, and HEAT repeats;
GN Name=relch; Synonyms=kiaa1468;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: May regulate intracellular cholesterol transport.
CC {ECO:0000250|UniProtKB:Q9P260}.
CC -!- SUBCELLULAR LOCATION: Recycling endosome
CC {ECO:0000250|UniProtKB:Q9P260}. Golgi apparatus, trans-Golgi network
CC {ECO:0000250|UniProtKB:Q9P260}.
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DR EMBL; BC124571; AAI24572.1; -; mRNA.
DR RefSeq; NP_001120526.1; NM_001127054.1.
DR AlphaFoldDB; Q08BT5; -.
DR STRING; 8364.ENSXETP00000052078; -.
DR PaxDb; Q08BT5; -.
DR GeneID; 100145663; -.
DR KEGG; xtr:100145663; -.
DR CTD; 57614; -.
DR Xenbase; XB-GENE-985071; relch.
DR eggNOG; KOG0211; Eukaryota.
DR InParanoid; Q08BT5; -.
DR OrthoDB; 73423at2759; -.
DR Proteomes; UP000008143; Chromosome 6.
DR Proteomes; UP000790000; Unplaced.
DR ExpressionAtlas; Q08BT5; differential.
DR GO; GO:0055037; C:recycling endosome; ISS:UniProtKB.
DR GO; GO:0005802; C:trans-Golgi network; ISS:UniProtKB.
DR GO; GO:0032367; P:intracellular cholesterol transport; ISS:UniProtKB.
DR Gene3D; 1.25.10.10; -; 2.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR021133; HEAT_type_2.
DR InterPro; IPR006594; LisH.
DR InterPro; IPR040362; RELCH.
DR PANTHER; PTHR32059; PTHR32059; 1.
DR SUPFAM; SSF48371; SSF48371; 1.
DR PROSITE; PS50077; HEAT_REPEAT; 1.
DR PROSITE; PS50896; LISH; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Endosome; Golgi apparatus; Lipid transport;
KW Reference proteome; Repeat; Transport.
FT CHAIN 1..1196
FT /note="RAB11-binding protein RELCH homolog"
FT /id="PRO_0000313096"
FT DOMAIN 234..266
FT /note="LisH"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00126"
FT REPEAT 620..659
FT /note="HEAT 1"
FT /evidence="ECO:0000305"
FT REPEAT 984..1022
FT /note="HEAT 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00103"
FT REGION 1..73
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 159..180
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 195..225
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 370..393
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 333..374
FT /evidence="ECO:0000255"
FT COMPBIAS 27..41
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 42..70
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 166..180
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 370..387
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1196 AA; 132512 MW; 548ADD2498008B36 CRC64;
MAAPAAGSGP GGSSGGITGG AGGSLGVVGP STSTSSVNPF LSDSEEEEDG GEEEEEEEED
DNEEDDEDVS PLNERPAASL ASRYLQDEAD STLLPSAGPR LCLQPGEPGR VPLDAVAAQL
LRDQLLLTAL ELHTELLESG RELPRLRDYF SNPGNFERAT AAPPGFGGNT TASTGGQLNR
AGSISTLDSL DFARYSDDGN RETDERVAEN EVPLQERKNY KSSPEIQEPI KPLEKRALNF
LVNEYLLKNN NKLTSITFSD ENDDQDFELW DDVGLNTPKP PDLLQLYRNL SNHQTVSKDV
ADIAVGVIEG DLEPIQAVKQ IAPDSHISQQ AAIIKELEDK IILCNNEKAA LLEQIGNLER
QIESLQKENS ASGVCSAAPP TSDRLQSQTS EESDHYIDIQ ITDSDAKCEG TEERLPFQQS
ECEPVCQVSE DIPPSPELAK IRKTTLLSAP PSKAGVHFDK PNRKLSPAFH QALLSFCRMS
ADSRLGSEVS QIADSENGVM KMLGRCLPHI VPNVLLAKRE ELIPLILCTA CLHPESKERD
QLLHILFNLI KRPDDEQRQM ILTGCVAFAR HVGPTRVEAE LLPQCWEQIN HKYPERRLLV
AESCGDLAPY LPKEIRSSLV LAMLQQMLME DKADMVREAV IKSLGIIMGY IDDPDKYSQG
FELLLTALGD PSERVVSATH QVFLPAYAAW TMELGNLQSH LIPTLLSKIE KLLKEGEHGL
DEHKLHMYLS ALQSLIPSLF ATVLQNAPFT SKAKLQGEVP QIEVTRFPRP VSPLQDVATI
IGSREQLAVL LQLYDYQLEH EGTTGWESLL WVVNQLLPQL IEIVGRITVT STASVHEFSR
FFWRLCRTFG KIFTNTKVKP QFQEILRLSE ENIDSTAGNG VLTKATVPIY ATGVLTCYNQ
EEDRKLLVGF LEDVMTMLSL SHAPLDSLKA SFVELGTNPA YHELLLTVLW YGVVHTSALV
RCTAARMFEL LVKGVNETLV AQRVVPALIT LSSDPEISVR IATVPAFGTI METVTQRELL
ERVKMQLASF LEDPQYQDQH SLQTEIIRTF GRVGPNAEPR FRDDFVLPHL HKLSFVNNQQ
SVDSKRLDIA THLFEAYSAL SCCFISEELM MNHFLPGLRC LRTDMEQLSP EHEVILSSMI
KECEQKVENK TVQEPQGSMS IAASLVSEDT KTKFLNKMGQ LTTSGAMLAN VFQRKK