REM10_ARATH
ID REM10_ARATH Reviewed; 555 AA.
AC P0DH85; Q9SHV3;
DT 21-SEP-2011, integrated into UniProtKB/Swiss-Prot.
DT 21-SEP-2011, sequence version 1.
DT 03-AUG-2022, entry version 59.
DE RecName: Full=B3 domain-containing protein REM10;
DE AltName: Full=Protein REPRODUCTIVE MERISTEM 10;
GN Name=REM10; OrderedLocusNames=At2g24700; ORFNames=F27A10.1;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14993207; DOI=10.1101/gr.1515604;
RA Castelli V., Aury J.-M., Jaillon O., Wincker P., Clepet C., Menard M.,
RA Cruaud C., Quetier F., Scarpelli C., Schaechter V., Temple G., Caboche M.,
RA Weissenbach J., Salanoubat M.;
RT "Whole genome sequence comparisons and 'full-length' cDNA sequences: a
RT combined approach to evaluate and improve Arabidopsis genome annotation.";
RL Genome Res. 14:406-413(2004).
RN [4]
RP GENE FAMILY.
RX PubMed=18986826; DOI=10.1016/j.tplants.2008.09.006;
RA Swaminathan K., Peterson K., Jack T.;
RT "The plant B3 superfamily.";
RL Trends Plant Sci. 13:647-655(2008).
CC -!- INTERACTION:
CC P0DH85; Q84R27: At3g18960; NbExp=3; IntAct=EBI-15206518, EBI-2309076;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00326}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD26893.1; Type=Erroneous gene model prediction; Note=The predicted gene At2g24700 has been split into 2 genes: At2g24696 and At2g24700.; Evidence={ECO:0000305};
CC Sequence=BX819051; Type=Miscellaneous discrepancy; Note=Sequencing errors.; Evidence={ECO:0000305};
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DR EMBL; AC007266; AAD26893.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002685; AEC07620.1; -; Genomic_DNA.
DR EMBL; BX819051; -; NOT_ANNOTATED_CDS; mRNA.
DR PIR; H84639; H84639.
DR RefSeq; NP_180046.2; NM_128031.4.
DR AlphaFoldDB; P0DH85; -.
DR SMR; P0DH85; -.
DR BioGRID; 2358; 6.
DR IntAct; P0DH85; 6.
DR STRING; 3702.AT2G24700.1; -.
DR iPTMnet; P0DH85; -.
DR PaxDb; P0DH85; -.
DR PRIDE; P0DH85; -.
DR EnsemblPlants; AT2G24700.1; AT2G24700.1; AT2G24700.
DR GeneID; 817006; -.
DR Gramene; AT2G24700.1; AT2G24700.1; AT2G24700.
DR KEGG; ath:AT2G24700; -.
DR Araport; AT2G24700; -.
DR TAIR; locus:2047241; AT2G24700.
DR eggNOG; ENOG502SK57; Eukaryota.
DR HOGENOM; CLU_014437_2_1_1; -.
DR InParanoid; P0DH85; -.
DR OMA; CIRFCEV; -.
DR OrthoDB; 246503at2759; -.
DR PhylomeDB; P0DH85; -.
DR PRO; PR:P0DH85; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; P0DH85; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd10017; B3_DNA; 4.
DR Gene3D; 2.40.330.10; -; 4.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR InterPro; IPR039218; REM_fam.
DR PANTHER; PTHR31674; PTHR31674; 3.
DR Pfam; PF02362; B3; 4.
DR SMART; SM01019; B3; 4.
DR SUPFAM; SSF101936; SSF101936; 4.
DR PROSITE; PS50863; B3; 4.
PE 1: Evidence at protein level;
KW DNA-binding; Nucleus; Reference proteome; Repeat; Transcription;
KW Transcription regulation.
FT CHAIN 1..555
FT /note="B3 domain-containing protein REM10"
FT /id="PRO_0000375104"
FT DNA_BIND 11..103
FT /note="TF-B3 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT DNA_BIND 150..247
FT /note="TF-B3 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT DNA_BIND 276..372
FT /note="TF-B3 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT DNA_BIND 460..554
FT /note="TF-B3 4"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
SQ SEQUENCE 555 AA; 63258 MW; 70CBF382DD7AAB5F CRC64;
MANPLLYSPI NPQFFQPLLP GFTNHLDIPV AFFLKYLVGT NVGKTAELRS DASEMTWKVK
IDGRRLSNGW EDFTIAHDLR VGDIVVFRQE GELVFHVTAL GPSCCEIQYG EDTLEEDKIE
KLCGTENVSS KKKSLKREAE SAPDNSLDSC FVATVTGSNL KRDTLYIPKE FALSNGLMNK
YQIVLMNEEG ESWKIDLRRE AYNYGRFYMR RGWRSFCIAN GKKPGDVFAF KLVKNEETPM
IQLFPMTIED LDKLQSLPRH KIRKTEAAPS SPDLSSFVAT VTASNLSRDR LYLPKTFIMS
NGLLKKFQMC LMNEEGESWT IDVKHEAHTG RFLTIRGWRR FCVANGKKPG DLLKFKLVHN
EETPVLQLLP LNSEDLHKLN PSNDTRHGQS LKVTKKEFLG MEATENEFLG EEVYCNDSFK
ASEKDTLPFA EPINEDIRQG QCSQTIKQEY VSTEEKNSTS QNRFVTLTLT HSSKLNLPFE
FMKRNGIKKA GKITMVDRYD AKWRTSLLMD KIGTMSLGRG SKGFCEVNGV EMNESFILEL
IWEDTVPLLK FCSKV
