REM13_ARATH
ID REM13_ARATH Reviewed; 1045 AA.
AC P0CAP5; F4IPS4; Q9SJA0;
DT 26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 16-NOV-2011, sequence version 2.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=B3 domain-containing protein REM13;
DE AltName: Full=Protein REPRODUCTIVE MERISTEM 13;
GN Name=REM13; OrderedLocusNames=At2g24650; ORFNames=F25P17.5;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=18986826; DOI=10.1016/j.tplants.2008.09.006;
RA Swaminathan K., Peterson K., Jack T.;
RT "The plant B3 superfamily.";
RL Trends Plant Sci. 13:647-655(2008).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00326}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD23895.1; Type=Erroneous gene model prediction; Note=The predicted gene At2g24650 has been split into 2 genes: At2g24645 and At2g24650.; Evidence={ECO:0000305};
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DR EMBL; AC006954; AAD23895.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002685; AEC07610.1; -; Genomic_DNA.
DR PIR; C84639; C84639.
DR RefSeq; NP_180041.5; NM_128026.6.
DR AlphaFoldDB; P0CAP5; -.
DR SMR; P0CAP5; -.
DR PaxDb; P0CAP5; -.
DR PRIDE; P0CAP5; -.
DR EnsemblPlants; AT2G24650.1; AT2G24650.1; AT2G24650.
DR GeneID; 817001; -.
DR Gramene; AT2G24650.1; AT2G24650.1; AT2G24650.
DR KEGG; ath:AT2G24650; -.
DR Araport; AT2G24650; -.
DR TAIR; locus:2046668; AT2G24650.
DR HOGENOM; CLU_275767_0_0_1; -.
DR InParanoid; P0CAP5; -.
DR OrthoDB; 246503at2759; -.
DR PRO; PR:P0CAP5; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; P0CAP5; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd10017; B3_DNA; 7.
DR Gene3D; 2.40.330.10; -; 7.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR InterPro; IPR039218; REM_fam.
DR PANTHER; PTHR31674; PTHR31674; 4.
DR Pfam; PF02362; B3; 7.
DR SMART; SM01019; B3; 7.
DR SUPFAM; SSF101936; SSF101936; 7.
DR PROSITE; PS50863; B3; 7.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Repeat; Transcription;
KW Transcription regulation.
FT CHAIN 1..1045
FT /note="B3 domain-containing protein REM13"
FT /id="PRO_0000375107"
FT DNA_BIND 7..96
FT /note="TF-B3 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT DNA_BIND 157..253
FT /note="TF-B3 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT DNA_BIND 305..398
FT /note="TF-B3 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT DNA_BIND 474..570
FT /note="TF-B3 4"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT DNA_BIND 643..738
FT /note="TF-B3 5"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT DNA_BIND 815..910
FT /note="TF-B3 6"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT DNA_BIND 940..1035
FT /note="TF-B3 7"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT REGION 121..147
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 423..449
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 606..625
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 127..142
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1045 AA; 117805 MW; D42D654A2053CB08 CRC64;
MANSRIYPQF FHTLVPSFHT HLMIPEDFFS EYIEGRSVAE LKLDFSDKSW EVKLSDRRIT
DGWEEFVVAN DFRIGDVVAF RYVGNLVFHV SNLGPNYYEI EHNDGESLLR KRLHQVDFSS
NNGDVCDSEE LPKEKKAKTN SEEADAVSSS SSADKSCFMA IITALDLTTD TLYLPLHFTS
ANGLTRKNRE IILTDGGERS RVLDLRFDES SGTFYISRGW RNFCDENGQK AGGFFLFKLV
GKGETLVLSF CPTESINGEE NITREDSKDE CSSLDSLMNI VEKKKYIPKP RGSPYSSYSP
SHKQFVTFTL PPDYARIGKL SLSAPFVREN GINKPGEICL LDKHGRKWLT SLLLDSKGTM
SLGKGWKEFV KANSLETGFT LKLIWEETTP VLSLCSPESN SDREQEEISK AIEKHSLFID
PSNRDKISNN DKEENMSWER KKDHLKSRDS TLSSQKQFVT ITITPSSDRL VSLSNDSCLV
VVSLLYFDMR LPKVFTRENG INKPGRITLL GKDGIKQQTN LLFDKANGAM SLGHGWKDFV
KDNGLKTGDS FTLKLIWEDQ TPVLSLCPAD CSIDREAGGG RSETNQKKSL PIEPSTCKKI
RKDVNIKDDN SKEKNDKEES KSVDGERKYL RGTYLTPSSQ KHFVTLTITP SSIKKDRLIL
SPQFARKNNI DKPGMIYLLD TDGTKWLISL QRDKKGTMSL GKGWKEFAEA NDFKLGESFT
MELVWEDTTP MLSLLRTEFR SSKANEKESI SSEHKTRESS PTIKNRIVTP ALTPEDVKAC
KLILPSQFMK KIRTVDKERN HLKGRDLNPS CQKQFVTFTI TPTCVGKNRL ILSAQFAREN
NINQPGTIYL LDTDGRKWLT TVKRDKKGTM SLGKGWKEFA DTKDLKSGDS FTMELIWEDT
NPVLSLLRTK FSSSKSNKEE SIFLEPKSRD SSSPTIVNRF VTLALTPEDV TACKLILPSQ
FMKANGINNK LGKITLLGEN GVEWPGYMLS LDGTLALGNG WEGFCEANGV KLGQTFTLEF
VNEQDTTTTP VLKFSSVETI YKNVN
