REM15_ARATH
ID REM15_ARATH Reviewed; 528 AA.
AC O23076;
DT 26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 26-MAY-2009, sequence version 2.
DT 25-MAY-2022, entry version 138.
DE RecName: Full=Putative B3 domain-containing protein REM15;
DE AltName: Full=Protein REPRODUCTIVE MERISTEM 15;
GN Name=REM15.15; OrderedLocusNames=At4g00260; ORFNames=F5I10.15;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=18986826; DOI=10.1016/j.tplants.2008.09.006;
RA Swaminathan K., Peterson K., Jack T.;
RT "The plant B3 superfamily.";
RL Trends Plant Sci. 13:647-655(2008).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00326}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAB62834.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=AAF02792.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=CAB80784.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AF013293; AAB62834.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AF195115; AAF02792.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AL161471; CAB80784.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002687; AEE81847.1; -; Genomic_DNA.
DR PIR; T01545; T01545.
DR RefSeq; NP_567162.2; NM_116247.2.
DR AlphaFoldDB; O23076; -.
DR SMR; O23076; -.
DR STRING; 3702.AT4G00260.1; -.
DR PaxDb; O23076; -.
DR PRIDE; O23076; -.
DR EnsemblPlants; AT4G00260.1; AT4G00260.1; AT4G00260.
DR GeneID; 828225; -.
DR Gramene; AT4G00260.1; AT4G00260.1; AT4G00260.
DR KEGG; ath:AT4G00260; -.
DR Araport; AT4G00260; -.
DR TAIR; locus:2126016; AT4G00260.
DR eggNOG; ENOG502SK57; Eukaryota.
DR HOGENOM; CLU_014437_2_1_1; -.
DR InParanoid; O23076; -.
DR OMA; RRFCIAN; -.
DR OrthoDB; 246503at2759; -.
DR PhylomeDB; O23076; -.
DR PRO; PR:O23076; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; O23076; baseline and differential.
DR Genevisible; O23076; AT.
DR GO; GO:0005634; C:nucleus; IDA:TAIR.
DR GO; GO:0043565; F:sequence-specific DNA binding; IDA:TAIR.
DR GO; GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.
DR GO; GO:0010601; P:positive regulation of auxin biosynthetic process; IGI:TAIR.
DR CDD; cd10017; B3_DNA; 4.
DR Gene3D; 2.40.330.10; -; 4.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR InterPro; IPR039218; REM_fam.
DR PANTHER; PTHR31674; PTHR31674; 3.
DR Pfam; PF02362; B3; 4.
DR SMART; SM01019; B3; 4.
DR SUPFAM; SSF101936; SSF101936; 4.
DR PROSITE; PS50863; B3; 4.
PE 3: Inferred from homology;
KW DNA-binding; Nucleus; Reference proteome; Repeat; Transcription;
KW Transcription regulation.
FT CHAIN 1..528
FT /note="Putative B3 domain-containing protein REM15"
FT /id="PRO_0000375109"
FT DNA_BIND 3..95
FT /note="TF-B3 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT DNA_BIND 135..231
FT /note="TF-B3 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT DNA_BIND 279..376
FT /note="TF-B3 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT DNA_BIND 425..522
FT /note="TF-B3 4"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT REGION 234..253
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 528 AA; 60035 MW; 6BAEE4405D1B8126 CRC64;
MAHQHFFKPL LPGFHASLTI PVAFFLKYIE GRYEQKTAKL RSDASKRTWE VKIDGQRLTD
GWKEFAVSHD LRIGDIVVFR QESDLAFHVT LLGPSCCGIQ YGSCSVEKNN LGDEKKKVKE
NPNGEAESSS RDPSCFVANV APSSLRYDLM RFPRGFVRDN GVVGSGEIVL MNEKGRSWNF
NLRQKPSNGT VYVRGGWVSF CDANGLKAGD NYTFKLIKRA GTLVLRLLPN EPKEEANEVS
LPEEPESDAE RNLEKIQRKE KVKKNVTREA ESSSQDPSCF VANVSPSSLR YDTLYLPKRF
MRENGVDKRC GEMILINEKG KSWTLDLKVK KSSGTSLIKR GWRSFCSANG LRAGSIITLK
LIKKRATLVL RLIPNEPEEA NEVVSLSTEQ ESDEESIHDE KISRRKSLLS ENRFVTLTLT
PYTIQSSLLN ENLLCESMFQ RLPVPFTRMN GINEETKMTL LDKHGVKWLT TLRFEDDKRK
RLRMVGGWQG FIQANDVKAN ESIMLELIWE EETSCVLKFC SKVKLEIK
