REM22_ARATH
ID REM22_ARATH Reviewed; 276 AA.
AC Q9STF1; A8MSE6;
DT 26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 25-MAY-2022, entry version 104.
DE RecName: Full=B3 domain-containing protein REM22;
DE AltName: Full=Protein REPRODUCTIVE MERISTEM 22;
GN Name=REM22; OrderedLocusNames=At3g46770; ORFNames=T6H20.200;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=18986826; DOI=10.1016/j.tplants.2008.09.006;
RA Swaminathan K., Peterson K., Jack T.;
RT "The plant B3 superfamily.";
RL Trends Plant Sci. 13:647-655(2008).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00326}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q9STF1-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q9STF1-2; Sequence=VSP_037328;
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DR EMBL; AL096859; CAB51188.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE78202.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE78203.1; -; Genomic_DNA.
DR PIR; T12971; T12971.
DR RefSeq; NP_001078253.1; NM_001084784.2. [Q9STF1-2]
DR RefSeq; NP_190261.1; NM_114544.3. [Q9STF1-1]
DR AlphaFoldDB; Q9STF1; -.
DR SMR; Q9STF1; -.
DR STRING; 3702.AT3G46770.1; -.
DR PaxDb; Q9STF1; -.
DR PRIDE; Q9STF1; -.
DR ProteomicsDB; 225953; -. [Q9STF1-1]
DR EnsemblPlants; AT3G46770.1; AT3G46770.1; AT3G46770. [Q9STF1-1]
DR EnsemblPlants; AT3G46770.2; AT3G46770.2; AT3G46770. [Q9STF1-2]
DR GeneID; 823830; -.
DR Gramene; AT3G46770.1; AT3G46770.1; AT3G46770. [Q9STF1-1]
DR Gramene; AT3G46770.2; AT3G46770.2; AT3G46770. [Q9STF1-2]
DR KEGG; ath:AT3G46770; -.
DR Araport; AT3G46770; -.
DR TAIR; locus:2102812; AT3G46770.
DR InParanoid; Q9STF1; -.
DR OMA; NIWRMEM; -.
DR OrthoDB; 1126273at2759; -.
DR PhylomeDB; Q9STF1; -.
DR PRO; PR:Q9STF1; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9STF1; baseline and differential.
DR Genevisible; Q9STF1; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd10017; B3_DNA; 1.
DR Gene3D; 2.40.330.10; -; 1.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR Pfam; PF02362; B3; 1.
DR SMART; SM01019; B3; 1.
DR SUPFAM; SSF101936; SSF101936; 2.
DR PROSITE; PS50863; B3; 1.
PE 3: Inferred from homology;
KW Alternative splicing; DNA-binding; Nucleus; Reference proteome;
KW Transcription; Transcription regulation.
FT CHAIN 1..276
FT /note="B3 domain-containing protein REM22"
FT /id="PRO_0000375115"
FT DNA_BIND 11..115
FT /note="TF-B3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT REGION 141..164
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 141..158
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT VAR_SEQ 1..66
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000305"
FT /id="VSP_037328"
SQ SEQUENCE 276 AA; 31951 MW; DF7C5A5F77C3D2B4 CRC64;
MEENSSKKKL SETMSIQDTV LKFFRVYIPN QTADDMNLPL VSDKISGKPL PRKVTVKSVS
SGNIWRMEMK ANGNTVFLRD GWKKIVKDEN VTEPIFLEFE FDGYGVFHFC VYEYGSMCKR
MRSPMEKEVI KVDSEEDVLV GNEESTKGLE ESPRRGGTSR RRAKLKTKSH KIYEHLDNKL
NPSFPVDMTQ NRTRIPSLLI KDYNLTFPNM VIMRDKIGIL KRRIVIWKNR SVYLNGIGSI
IRRNHVKPGN EVVFELKMVN GYHGLVHEIK VHIIKA
