RER2_ARATH
ID RER2_ARATH Reviewed; 339 AA.
AC Q9C9Z3; Q0WS36;
DT 24-JUN-2015, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 03-AUG-2022, entry version 113.
DE RecName: Full=Protein RETICULATA-RELATED 2, chloroplastic {ECO:0000303|PubMed:23596191};
DE Flags: Precursor;
GN Name=RER2 {ECO:0000303|PubMed:27862469};
GN OrderedLocusNames=At3g08630 {ECO:0000312|Araport:AT3G08630,
GN ECO:0000312|EMBL:AEE74655.1};
GN ORFNames=F17O14.10 {ECO:0000312|EMBL:AAG51344.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Shinn P., Chen H., Cheuk R.F., Kim C.J., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY, NOMENCLATURE, AND FUNCTION.
RX PubMed=23596191; DOI=10.1104/pp.113.217323;
RA Perez-Perez J.M., Esteve-Bruna D., Gonzalez-Bayon R., Kangasjarvi S.,
RA Caldana C., Hannah M.A., Willmitzer L., Ponce M.R., Micol J.L.;
RT "Functional redundancy and divergence within the Arabidopsis RETICULATA-
RT RELATED gene family.";
RL Plant Physiol. 162:589-603(2013).
CC -!- FUNCTION: May play a role in leaf development.
CC {ECO:0000305|PubMed:23596191}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast membrane
CC {ECO:0000250|UniProtKB:Q9C9Z2}; Multi-pass membrane protein
CC {ECO:0000255}.
CC -!- SIMILARITY: Belongs to the RETICULATA family. {ECO:0000305}.
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DR EMBL; AC012562; AAG51344.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE74655.1; -; Genomic_DNA.
DR EMBL; BT012218; AAS76705.1; -; mRNA.
DR EMBL; BT012416; AAS92332.1; -; mRNA.
DR EMBL; AK228104; BAF00063.1; -; mRNA.
DR RefSeq; NP_187475.1; NM_111697.3.
DR AlphaFoldDB; Q9C9Z3; -.
DR IntAct; Q9C9Z3; 1.
DR STRING; 3702.AT3G08630.1; -.
DR MetOSite; Q9C9Z3; -.
DR PaxDb; Q9C9Z3; -.
DR PRIDE; Q9C9Z3; -.
DR ProteomicsDB; 234724; -.
DR EnsemblPlants; AT3G08630.1; AT3G08630.1; AT3G08630.
DR GeneID; 820010; -.
DR Gramene; AT3G08630.1; AT3G08630.1; AT3G08630.
DR KEGG; ath:AT3G08630; -.
DR Araport; AT3G08630; -.
DR TAIR; locus:2077828; AT3G08630.
DR eggNOG; ENOG502QRRA; Eukaryota.
DR HOGENOM; CLU_036961_0_0_1; -.
DR InParanoid; Q9C9Z3; -.
DR OMA; IFANCPP; -.
DR OrthoDB; 1065362at2759; -.
DR PhylomeDB; Q9C9Z3; -.
DR PRO; PR:Q9C9Z3; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9C9Z3; baseline and differential.
DR Genevisible; Q9C9Z3; AT.
DR GO; GO:0031969; C:chloroplast membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0009536; C:plastid; HDA:TAIR.
DR InterPro; IPR021825; RETICULATA-related.
DR Pfam; PF11891; RETICULATA-like; 1.
PE 2: Evidence at transcript level;
KW Chloroplast; Developmental protein; Membrane; Plastid; Reference proteome;
KW Transit peptide; Transmembrane; Transmembrane helix.
FT TRANSIT 1..58
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 59..339
FT /note="Protein RETICULATA-RELATED 2, chloroplastic"
FT /evidence="ECO:0000255"
FT /id="PRO_0000433441"
FT TRANSMEM 148..168
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 213..233
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 68..92
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 33
FT /note="A -> T (in Ref. 4; BAF00063)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 339 AA; 35950 MW; A62B6DBD3A15B848 CRC64;
MAAMAAKLHI STKSDQSNVR LPRLINLSRD PTARVLFPRN GSVSSLHTNF SSPNIMVPCA
GGGGGGSIGN HGGGSGSGGG GGGYGGSEEE ESSPWGPLGL FIQGWRSRVA ADSQFPFKVL
MEMLVGVSAN VLGDMASRPN FGLNELDFVF STLVVGSILN FTLMYLLAPS AISHGSSNLL
PGIFRSCPSS HMFEQGNFTL MNRFGTLVYK GMVFATVGLA AGLVGTAISN GLIMLRKKID
PSFETPNKPP PTLLNSLTWA THMGVSANVR YQTLNGAEFL LEKSLPPLVF KTSVIALRVV
NNVLGGMSFV TLARMTGSQS VEEEKKIEMS EISEKEKED
