RES_PSEPK
ID RES_PSEPK Reviewed; 145 AA.
AC Q88K57;
DT 13-NOV-2019, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 85.
DE RecName: Full=Toxin Res {ECO:0000303|PubMed:30315706};
DE EC=2.4.2.- {ECO:0000250|UniProtKB:P9WLP9};
GN Name=res {ECO:0000303|PubMed:30315706}; OrderedLocusNames=PP_2434;
OS Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950
OS / KT2440).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=160488;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440;
RX PubMed=12534463; DOI=10.1046/j.1462-2920.2002.00366.x;
RA Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H.,
RA Martins dos Santos V.A.P., Fouts D.E., Gill S.R., Pop M., Holmes M.,
RA Brinkac L.M., Beanan M.J., DeBoy R.T., Daugherty S.C., Kolonay J.F.,
RA Madupu R., Nelson W.C., White O., Peterson J.D., Khouri H.M., Hance I.,
RA Chris Lee P., Holtzapple E.K., Scanlan D., Tran K., Moazzez A.,
RA Utterback T.R., Rizzo M., Lee K., Kosack D., Moestl D., Wedler H.,
RA Lauber J., Stjepandic D., Hoheisel J., Straetz M., Heim S., Kiewitz C.,
RA Eisen J.A., Timmis K.N., Duesterhoeft A., Tuemmler B., Fraser C.M.;
RT "Complete genome sequence and comparative analysis of the metabolically
RT versatile Pseudomonas putida KT2440.";
RL Environ. Microbiol. 4:799-808(2002).
RN [2] {ECO:0007744|PDB:6GW6}
RP X-RAY CRYSTALLOGRAPHY (2.21 ANGSTROMS) IN COMPLEX WITH ANTITOXIN, FUNCTION
RP AS A TOXIN, EXPRESSION IN E.COLI, AND SUBUNIT.
RC STRAIN=ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440;
RX PubMed=30315706; DOI=10.1111/mmi.14150;
RA Skjerning R.B., Senissar M., Winther K.S., Gerdes K., Brodersen D.E.;
RT "The RES domain toxins of RES-Xre toxin-antitoxin modules induce cell
RT stasis by degrading NAD+.";
RL Mol. Microbiol. 111:221-236(2019).
CC -!- FUNCTION: Toxic component of a type II toxin-antitoxin (TA) system.
CC Expression in E.coli inhibits cell growth. In vivo it is probably
CC neutralized by cognate antitoxin Xre; this has not been shown upon
CC expression in E.coli (PubMed:30315706). Probably depletes intracellular
CC NAD(+) (By similarity). {ECO:0000250|UniProtKB:Q7N4H9,
CC ECO:0000269|PubMed:30315706}.
CC -!- SUBUNIT: Homodimer. Forms a complex with cognate antitoxin Xre; the 2
CC toxin molecules dimerize and each contacts an Xre homodimer. Most Res-
CC Xre contacts are between the antitoxin molecule closest to the toxin.
CC {ECO:0000269|PubMed:30315706}.
CC -!- SIMILARITY: Belongs to the MbcT/ParT/Res family. {ECO:0000305}.
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DR EMBL; AE015451; AAN68046.1; -; Genomic_DNA.
DR RefSeq; NP_744582.1; NC_002947.4.
DR RefSeq; WP_003250527.1; NC_002947.4.
DR PDB; 6GW6; X-ray; 2.21 A; A/D=1-145.
DR PDBsum; 6GW6; -.
DR AlphaFoldDB; Q88K57; -.
DR SMR; Q88K57; -.
DR STRING; 160488.PP_2434; -.
DR EnsemblBacteria; AAN68046; AAN68046; PP_2434.
DR KEGG; ppu:PP_2434; -.
DR PATRIC; fig|160488.4.peg.2579; -.
DR eggNOG; COG5654; Bacteria.
DR HOGENOM; CLU_133611_0_1_6; -.
DR OMA; VTYCATS; -.
DR PhylomeDB; Q88K57; -.
DR BioCyc; PPUT160488:G1G01-2599-MON; -.
DR Proteomes; UP000000556; Chromosome.
DR GO; GO:0016779; F:nucleotidyltransferase activity; IEA:UniProtKB-KW.
DR InterPro; IPR014914; RES_dom.
DR Pfam; PF08808; RES; 1.
DR SMART; SM00953; RES; 1.
PE 1: Evidence at protein level;
KW 3D-structure; NAD; Nucleotidyltransferase; Reference proteome;
KW Toxin-antitoxin system; Transferase.
FT CHAIN 1..145
FT /note="Toxin Res"
FT /id="PRO_0000448607"
FT STRAND 2..8
FT /evidence="ECO:0007829|PDB:6GW6"
FT STRAND 10..12
FT /evidence="ECO:0007829|PDB:6GW6"
FT HELIX 15..18
FT /evidence="ECO:0007829|PDB:6GW6"
FT STRAND 27..29
FT /evidence="ECO:0007829|PDB:6GW6"
FT STRAND 32..37
FT /evidence="ECO:0007829|PDB:6GW6"
FT HELIX 38..48
FT /evidence="ECO:0007829|PDB:6GW6"
FT HELIX 53..55
FT /evidence="ECO:0007829|PDB:6GW6"
FT STRAND 61..66
FT /evidence="ECO:0007829|PDB:6GW6"
FT HELIX 83..85
FT /evidence="ECO:0007829|PDB:6GW6"
FT HELIX 87..100
FT /evidence="ECO:0007829|PDB:6GW6"
FT STRAND 104..109
FT /evidence="ECO:0007829|PDB:6GW6"
FT STRAND 111..113
FT /evidence="ECO:0007829|PDB:6GW6"
FT STRAND 117..121
FT /evidence="ECO:0007829|PDB:6GW6"
FT HELIX 126..130
FT /evidence="ECO:0007829|PDB:6GW6"
FT STRAND 132..136
FT /evidence="ECO:0007829|PDB:6GW6"
SQ SEQUENCE 145 AA; 16022 MW; F95428D597CDBD01 CRC64;
MILWRISAYA DLSGTGGLRV SGRWHQAGRP VVYAATSPPG AMLEVLVHLE IDPEDFPTTM
RLLRIELPDT VSQAQLPALQ PGWSAQPELT RTLGNRFLDD CSALLLPVPS AIMPSTTNYL
FNPRHPQAQS AKIQVEDFTP DSRLF