REX1B_MOUSE
ID REX1B_MOUSE Reviewed; 169 AA.
AC Q9CYZ6; Q3TUY7; Q9CRH2;
DT 02-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 03-AUG-2022, entry version 108.
DE RecName: Full=Required for excision 1-B domain-containing protein {ECO:0000305};
GN Name=Rex1bd {ECO:0000312|MGI:MGI:1913712};
OS Mus musculus (Mouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Mus; Mus.
OX NCBI_TaxID=10090;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=C57BL/6J; TISSUE=Embryo, and Tongue;
RX PubMed=16141072; DOI=10.1126/science.1112014;
RA Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
RA Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
RA Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.,
RA Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R.,
RA Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T.,
RA Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A.,
RA Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B.,
RA Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M.,
RA Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S.,
RA Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
RA Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D.,
RA Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M.,
RA Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H.,
RA Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V.,
RA Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S.,
RA Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H.,
RA Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N.,
RA Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F.,
RA Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G.,
RA Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z.,
RA Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
RA Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
RA Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S.,
RA Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K.,
RA Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R.,
RA van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H.,
RA Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M.,
RA Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C.,
RA Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S.,
RA Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K.,
RA Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M.,
RA Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C.,
RA Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A.,
RA Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.;
RT "The transcriptional landscape of the mammalian genome.";
RL Science 309:1559-1563(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Mammary gland;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [3]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC TISSUE=Liver, and Spleen;
RX PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
RA Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
RA Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
RT "A tissue-specific atlas of mouse protein phosphorylation and expression.";
RL Cell 143:1174-1189(2010).
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB27079.1; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; AK010635; BAB27079.1; ALT_FRAME; mRNA.
DR EMBL; AK013181; BAB28696.1; -; mRNA.
DR EMBL; AK160511; BAE35834.1; -; mRNA.
DR EMBL; BC028495; AAH28495.1; -; mRNA.
DR CCDS; CCDS22370.1; -.
DR RefSeq; NP_079853.1; NM_025577.2.
DR AlphaFoldDB; Q9CYZ6; -.
DR SMR; Q9CYZ6; -.
DR STRING; 10090.ENSMUSP00000074670; -.
DR PhosphoSitePlus; Q9CYZ6; -.
DR EPD; Q9CYZ6; -.
DR MaxQB; Q9CYZ6; -.
DR PaxDb; Q9CYZ6; -.
DR PeptideAtlas; Q9CYZ6; -.
DR PRIDE; Q9CYZ6; -.
DR ProteomicsDB; 253215; -.
DR Antibodypedia; 51892; 7 antibodies from 6 providers.
DR DNASU; 66462; -.
DR Ensembl; ENSMUST00000075175; ENSMUSP00000074670; ENSMUSG00000058833.
DR GeneID; 66462; -.
DR KEGG; mmu:66462; -.
DR UCSC; uc009mal.1; mouse.
DR CTD; 55049; -.
DR MGI; MGI:1913712; Rex1bd.
DR VEuPathDB; HostDB:ENSMUSG00000058833; -.
DR eggNOG; ENOG502S01K; Eukaryota.
DR GeneTree; ENSGT00390000011631; -.
DR HOGENOM; CLU_103386_0_0_1; -.
DR InParanoid; Q9CYZ6; -.
DR OMA; MVPTDFK; -.
DR OrthoDB; 1471953at2759; -.
DR PhylomeDB; Q9CYZ6; -.
DR TreeFam; TF332536; -.
DR BioGRID-ORCS; 66462; 1 hit in 72 CRISPR screens.
DR ChiTaRS; Rex1bd; mouse.
DR PRO; PR:Q9CYZ6; -.
DR Proteomes; UP000000589; Chromosome 8.
DR RNAct; Q9CYZ6; protein.
DR Bgee; ENSMUSG00000058833; Expressed in hindlimb stylopod muscle and 260 other tissues.
DR ExpressionAtlas; Q9CYZ6; baseline and differential.
DR Genevisible; Q9CYZ6; MM.
DR InterPro; IPR039491; REX1-B.
DR PANTHER; PTHR28309; PTHR28309; 1.
DR Pfam; PF14966; DNA_repr_REX1B; 1.
PE 1: Evidence at protein level;
KW Reference proteome.
FT CHAIN 1..169
FT /note="Required for excision 1-B domain-containing protein"
FT /id="PRO_0000305286"
FT CONFLICT 31
FT /note="T -> S (in Ref. 1; BAB27079)"
FT /evidence="ECO:0000305"
FT CONFLICT 44
FT /note="A -> T (in Ref. 1; BAB27079)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 169 AA; 18706 MW; B1491E49215CB029 CRC64;
MLTAATEVLA AADGPGSAES AWAWRDAPIA TLVQRIQQLQ NERAQAFRRL DQAHRQYLLS
GQHYDFPSYR SVVHEVTQAF AAASREVLAV EAELAGPRAQ PVLARHVRSL QELEQTRLAT
VALLQVMGTP GVSEQDPEKL HQLKIKVIKT MEAIGEVLQE LRFDAESAE
