REXO5_RAT
ID REXO5_RAT Reviewed; 754 AA.
AC A1A5R7;
DT 15-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 1.
DT 03-AUG-2022, entry version 102.
DE RecName: Full=RNA exonuclease 5;
DE EC=3.1.-.-;
DE AltName: Full=Putative RNA exonuclease NEF-sp;
GN Name=Rexo5;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Testis;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
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DR EMBL; BC128775; AAI28776.1; -; mRNA.
DR RefSeq; NP_001073174.1; NM_001079706.1.
DR AlphaFoldDB; A1A5R7; -.
DR SMR; A1A5R7; -.
DR STRING; 10116.ENSRNOP00000019654; -.
DR CarbonylDB; A1A5R7; -.
DR PhosphoSitePlus; A1A5R7; -.
DR PaxDb; A1A5R7; -.
DR PeptideAtlas; A1A5R7; -.
DR PRIDE; A1A5R7; -.
DR Ensembl; ENSRNOT00000019654; ENSRNOP00000019654; ENSRNOG00000014513.
DR GeneID; 309036; -.
DR KEGG; rno:309036; -.
DR UCSC; RGD:1305412; rat.
DR CTD; 81691; -.
DR RGD; 1305412; Rexo5.
DR eggNOG; KOG2248; Eukaryota.
DR GeneTree; ENSGT00940000161162; -.
DR HOGENOM; CLU_024781_0_0_1; -.
DR InParanoid; A1A5R7; -.
DR OrthoDB; 593068at2759; -.
DR PhylomeDB; A1A5R7; -.
DR PRO; PR:A1A5R7; -.
DR Proteomes; UP000002494; Chromosome 1.
DR Bgee; ENSRNOG00000014513; Expressed in testis and 18 other tissues.
DR ExpressionAtlas; A1A5R7; baseline and differential.
DR GO; GO:0005730; C:nucleolus; IEA:Ensembl.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0004527; F:exonuclease activity; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR CDD; cd06145; REX1_like; 1.
DR Gene3D; 3.30.420.10; -; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR034922; REX1-like_exo.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000504; RRM_dom.
DR Pfam; PF00929; RNase_T; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00479; EXOIII; 1.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF53098; SSF53098; 1.
DR SUPFAM; SSF54928; SSF54928; 1.
DR PROSITE; PS50102; RRM; 2.
PE 2: Evidence at transcript level;
KW Exonuclease; Hydrolase; Nuclease; Reference proteome; Repeat; RNA-binding.
FT CHAIN 1..754
FT /note="RNA exonuclease 5"
FT /id="PRO_0000287347"
FT DOMAIN 222..370
FT /note="Exonuclease"
FT DOMAIN 488..562
FT /note="RRM 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT DOMAIN 583..662
FT /note="RRM 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT REGION 1..36
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..19
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 754 AA; 86052 MW; 59A3FB83B8CB32B6 CRC64;
MELEEEENPR KRKETPNSAL TTELDRPSWD VQDPEPQAKK ARLSTILFTD NCEVTHRQLC
ELLKYAILGK STLPKPSWCQ LLHQKQLNNV VVFILKGMSQ LHFYRFYLEF RFLRKTFRHK
FSLPPPTSSF LFDIIGLQKK KSARGCPRTV EGPLISATLK SSIDLQNDPI IQKYGYKNVS
LTRCLLTKEE MKTFHFPLQG SPNCENFILL KYSGFITDSS PLFGLDCEVC LTSMGKELTR
ISLVAEGGYC LMDELVKPDF KILDYLTSFS GITKEILNPV TTKLKDVQKL LRELLPPDAV
LVGHCLDLDL RVLKIIHPYV IDTSLLYIGK QGRRFKLTFL AKVILGKDIQ CPNKLGHDGI
EDARTALELV QYFLKYGPKK IAEFNLEALA ANQEQGNKEG ATHMRSVLEC LDSMGQKLLF
LTQDIDELSS YRNCQTVKCS SNKEVLEQAR VEVPLFPFNI VQFSFRPFPP LFAEEMKNNM
KTRWTEMSTI YAGPFSKDCN VGSLKKVFSS LGPVQSITLV LETYRPYFSI QYELLEAAQL
AIETMNGTIL EGSCIRVHRL LTELTLECDT LVRELEQDSE NQGTIYVAGI GETFKEHLLE
QSNLFPDLEA VILPKELKSR KQKNYCFLKF KTFNSAQVAL EVLKGKDWKL KGRNALTSRH
LQAWLKNIHP EPSMPMGLRI VPPLLERHIF RTLKANHPKI VAWRWSRRIE KLYHSLSPGT
FCLILLPGTK NTFGSHPGLG LMKIKEEEGG DTLL