RF1_DICT6
ID RF1_DICT6 Reviewed; 367 AA.
AC B5YDB2;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 25-NOV-2008, sequence version 1.
DT 03-AUG-2022, entry version 71.
DE RecName: Full=Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093};
DE Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};
GN Name=prfA {ECO:0000255|HAMAP-Rule:MF_00093}; OrderedLocusNames=DICTH_0647;
OS Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12).
OC Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.
OX NCBI_TaxID=309799;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 35947 / DSM 3960 / H-6-12;
RX PubMed=24558247; DOI=10.1128/genomea.00109-14;
RA Coil D.A., Badger J.H., Forberger H.C., Riggs F., Madupu R., Fedorova N.,
RA Ward N., Robb F.T., Eisen J.A.;
RT "Complete Genome Sequence of the Extreme Thermophile Dictyoglomus
RT thermophilum H-6-12.";
RL Genome Announc. 2:0-0(2014).
CC -!- FUNCTION: Peptide chain release factor 1 directs the termination of
CC translation in response to the peptide chain termination codons UAG and
CC UAA. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- PTM: Methylated by PrmC. Methylation increases the termination
CC efficiency of RF1. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SIMILARITY: Belongs to the prokaryotic/mitochondrial release factor
CC family. {ECO:0000255|HAMAP-Rule:MF_00093}.
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DR EMBL; CP001146; ACI19547.1; -; Genomic_DNA.
DR RefSeq; WP_012548179.1; NC_011297.1.
DR AlphaFoldDB; B5YDB2; -.
DR SMR; B5YDB2; -.
DR STRING; 309799.DICTH_0647; -.
DR EnsemblBacteria; ACI19547; ACI19547; DICTH_0647.
DR KEGG; dth:DICTH_0647; -.
DR eggNOG; COG0216; Bacteria.
DR HOGENOM; CLU_036856_0_1_0; -.
DR OMA; ISDHRVG; -.
DR OrthoDB; 928964at2; -.
DR Proteomes; UP000001733; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016149; F:translation release factor activity, codon specific; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00093; Rel_fac_1; 1.
DR InterPro; IPR005139; PCRF.
DR InterPro; IPR000352; Pep_chain_release_fac_I.
DR InterPro; IPR045853; Pep_chain_release_fac_I_sf.
DR InterPro; IPR004373; RF-1.
DR Pfam; PF03462; PCRF; 1.
DR Pfam; PF00472; RF-1; 1.
DR SMART; SM00937; PCRF; 1.
DR SUPFAM; SSF75620; SSF75620; 1.
DR TIGRFAMs; TIGR00019; prfA; 1.
DR PROSITE; PS00745; RF_PROK_I; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Methylation; Protein biosynthesis.
FT CHAIN 1..367
FT /note="Peptide chain release factor 1"
FT /id="PRO_1000117236"
FT MOD_RES 238
FT /note="N5-methylglutamine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00093"
SQ SEQUENCE 367 AA; 42442 MW; EFE37EA821B1C351 CRC64;
MLQKLVLDKL EEIEKRFKEI ENLLTKEEII SDLSRYQSLL KERAKIEEIV EKFSEYKKLL
KEREDLEVMT KEEQDEDLRS LAEAELEEIE KKLEKIEFDL KALLLPKDPN DEKNIIMEIR
AGTGGEEAAL FAADLFRMYV GYAQKKGWKV EIVSSNPTGL GGYKEIIFIV EGKGAYSRLK
FESGVHRVQR VPITESSGRI HTSTATVAVL PEMEEVDVEI DPKDLRIETF RSGGAGGQHV
NKTESGVRIT HIPSGIVVQC QDERSQHQNR EKAMKVLRAR LYEYYQREKE NEIASQRRQQ
VGTGERSEKI RTYNFPQRRV TDHRINYSSF QLEEVLSGEL DEFIDRLILA EKEEQIKKLF
EEVGATS