RF1_FLAPJ
ID RF1_FLAPJ Reviewed; 357 AA.
AC A6H0W3;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 24-JUL-2007, sequence version 1.
DT 03-AUG-2022, entry version 78.
DE RecName: Full=Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093};
DE Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};
GN Name=prfA {ECO:0000255|HAMAP-Rule:MF_00093}; OrderedLocusNames=FP1921;
OS Flavobacterium psychrophilum (strain ATCC 49511 / DSM 21280 / CIP 103535 /
OS JIP02/86).
OC Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Flavobacterium.
OX NCBI_TaxID=402612;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 49511 / DSM 21280 / CIP 103535 / JIP02/86;
RX PubMed=17592475; DOI=10.1038/nbt1313;
RA Duchaud E., Boussaha M., Loux V., Bernardet J.-F., Michel C., Kerouault B.,
RA Mondot S., Nicolas P., Bossy R., Caron C., Bessieres P., Gibrat J.-F.,
RA Claverol S., Dumetz F., Le Henaff M., Benmansour A.;
RT "Complete genome sequence of the fish pathogen Flavobacterium
RT psychrophilum.";
RL Nat. Biotechnol. 25:763-769(2007).
CC -!- FUNCTION: Peptide chain release factor 1 directs the termination of
CC translation in response to the peptide chain termination codons UAG and
CC UAA. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- PTM: Methylated by PrmC. Methylation increases the termination
CC efficiency of RF1. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SIMILARITY: Belongs to the prokaryotic/mitochondrial release factor
CC family. {ECO:0000255|HAMAP-Rule:MF_00093}.
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DR EMBL; AM398681; CAL43987.1; -; Genomic_DNA.
DR RefSeq; WP_011964025.1; NC_009613.3.
DR RefSeq; YP_001296789.1; NC_009613.3.
DR AlphaFoldDB; A6H0W3; -.
DR SMR; A6H0W3; -.
DR STRING; 402612.FP1921; -.
DR EnsemblBacteria; CAL43987; CAL43987; FP1921.
DR GeneID; 66551896; -.
DR KEGG; fps:FP1921; -.
DR PATRIC; fig|402612.5.peg.1946; -.
DR eggNOG; COG0216; Bacteria.
DR HOGENOM; CLU_036856_0_1_10; -.
DR OMA; ISDHRVG; -.
DR Proteomes; UP000006394; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016149; F:translation release factor activity, codon specific; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00093; Rel_fac_1; 1.
DR InterPro; IPR005139; PCRF.
DR InterPro; IPR000352; Pep_chain_release_fac_I.
DR InterPro; IPR045853; Pep_chain_release_fac_I_sf.
DR InterPro; IPR004373; RF-1.
DR Pfam; PF03462; PCRF; 1.
DR Pfam; PF00472; RF-1; 1.
DR SMART; SM00937; PCRF; 1.
DR SUPFAM; SSF75620; SSF75620; 1.
DR TIGRFAMs; TIGR00019; prfA; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Methylation; Protein biosynthesis; Reference proteome.
FT CHAIN 1..357
FT /note="Peptide chain release factor 1"
FT /id="PRO_1000004890"
FT MOD_RES 233
FT /note="N5-methylglutamine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00093"
SQ SEQUENCE 357 AA; 40313 MW; FD5454DA5ABD1843 CRC64;
MLDRLQIIKQ KFDEISDLII QPDVIADQKR YVALNQEYKG LKSLVEKRDE YVILMANIEE
ANEIIADGSD ADMVEMAKMQ LEEAKERLPE LEEEIKFLLI PKDAEDAKNV MVEIRAGTGG
DEASIFAGDL FRMYTKYCEN RGWRTSVVDM NEGTSGGFKE VIFEVTGEDV YGTLKFEAGV
HRVQRVPQTE TQGRVHTSAA TVMVLPEAEE FDVQIDMNDV RVDFFCSSGP GGQSVNTTKS
AVRLTHIPTG LVAQCQDQKS QHKNKDKAFG VLRSRLYEQE LAKKQADDAV KRTSQVSSGD
RSAKIRTYNY SQGRVTDHRI GLDVFDMDGV MNGKIQKFVD ELQLVNNMEK LKESEIF