RF1_KOCRD
ID RF1_KOCRD Reviewed; 369 AA.
AC B2GLX4;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 10-JUN-2008, sequence version 1.
DT 25-MAY-2022, entry version 76.
DE RecName: Full=Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093};
DE Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};
GN Name=prfA {ECO:0000255|HAMAP-Rule:MF_00093}; OrderedLocusNames=KRH_09680;
OS Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201).
OC Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.
OX NCBI_TaxID=378753;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 9341 / DSM 348 / NBRC 103217 / DC2201;
RX PubMed=18408034; DOI=10.1128/jb.01853-07;
RA Takarada H., Sekine M., Kosugi H., Matsuo Y., Fujisawa T., Omata S.,
RA Kishi E., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.;
RT "Complete genome sequence of the soil actinomycete Kocuria rhizophila.";
RL J. Bacteriol. 190:4139-4146(2008).
CC -!- FUNCTION: Peptide chain release factor 1 directs the termination of
CC translation in response to the peptide chain termination codons UAG and
CC UAA. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- PTM: Methylated by PrmC. Methylation increases the termination
CC efficiency of RF1. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SIMILARITY: Belongs to the prokaryotic/mitochondrial release factor
CC family. {ECO:0000255|HAMAP-Rule:MF_00093}.
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DR EMBL; AP009152; BAG29315.1; -; Genomic_DNA.
DR RefSeq; WP_012398036.1; NZ_VECX01000011.1.
DR AlphaFoldDB; B2GLX4; -.
DR SMR; B2GLX4; -.
DR STRING; 378753.KRH_09680; -.
DR EnsemblBacteria; BAG29315; BAG29315; KRH_09680.
DR KEGG; krh:KRH_09680; -.
DR eggNOG; COG0216; Bacteria.
DR HOGENOM; CLU_036856_0_1_11; -.
DR OMA; ISDHRVG; -.
DR OrthoDB; 928964at2; -.
DR Proteomes; UP000008838; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016149; F:translation release factor activity, codon specific; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00093; Rel_fac_1; 1.
DR InterPro; IPR005139; PCRF.
DR InterPro; IPR000352; Pep_chain_release_fac_I.
DR InterPro; IPR045853; Pep_chain_release_fac_I_sf.
DR InterPro; IPR004373; RF-1.
DR Pfam; PF03462; PCRF; 1.
DR Pfam; PF00472; RF-1; 1.
DR SMART; SM00937; PCRF; 1.
DR SUPFAM; SSF75620; SSF75620; 1.
DR TIGRFAMs; TIGR00019; prfA; 1.
DR PROSITE; PS00745; RF_PROK_I; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Methylation; Protein biosynthesis; Reference proteome.
FT CHAIN 1..369
FT /note="Peptide chain release factor 1"
FT /id="PRO_1000093466"
FT MOD_RES 234
FT /note="N5-methylglutamine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00093"
SQ SEQUENCE 369 AA; 40651 MW; 3B4712222C2AEA5D CRC64;
MSDPVQPLLD EHAQLQRELA DPAVHADAGR ARKLGRRYSE LNGIVEAHRR VERLSEDLEA
ARELGSMDPE LAAEVKPLEE ELAVAREALR RKLVPRDPDD GRNVILEVKA GEGGDESALF
AGDLLRMYMR FAEQSGLKTE ILSSTPTELG GYKDVQLAVK GSSSDPSEGA WARFKYEGGV
HRVQRVPVTE SQGRVHTSAA GVLVFPEVDE PDEIDISQND LKIDVYRSSG PGGQSVNTTD
SAVRITHVPT GIVVSMQNEK SQLQNREAAM RVLRARLLAH QQEQIDAENA AARKSQVRTV
DRSERIRTYN FPENRIADHR TGYKAYNLDH VLDGALEPVI ASAVELDEKA RLEQLGQDSA
EQGSAGRRG