RF1_MAGSA
ID RF1_MAGSA Reviewed; 354 AA.
AC Q2W6V3;
DT 12-DEC-2006, integrated into UniProtKB/Swiss-Prot.
DT 10-JAN-2006, sequence version 1.
DT 03-AUG-2022, entry version 93.
DE RecName: Full=Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093};
DE Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};
GN Name=prfA {ECO:0000255|HAMAP-Rule:MF_00093}; OrderedLocusNames=amb1618;
OS Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
OC Rhodospirillaceae; Magnetospirillum.
OX NCBI_TaxID=342108;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AMB-1 / ATCC 700264;
RX PubMed=16303747; DOI=10.1093/dnares/dsi002;
RA Matsunaga T., Okamura Y., Fukuda Y., Wahyudi A.T., Murase Y., Takeyama H.;
RT "Complete genome sequence of the facultative anaerobic magnetotactic
RT bacterium Magnetospirillum sp. strain AMB-1.";
RL DNA Res. 12:157-166(2005).
CC -!- FUNCTION: Peptide chain release factor 1 directs the termination of
CC translation in response to the peptide chain termination codons UAG and
CC UAA. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- PTM: Methylated by PrmC. Methylation increases the termination
CC efficiency of RF1. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SIMILARITY: Belongs to the prokaryotic/mitochondrial release factor
CC family. {ECO:0000255|HAMAP-Rule:MF_00093}.
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DR EMBL; AP007255; BAE50422.1; -; Genomic_DNA.
DR RefSeq; WP_011384027.1; NC_007626.1.
DR AlphaFoldDB; Q2W6V3; -.
DR SMR; Q2W6V3; -.
DR STRING; 342108.amb1618; -.
DR PRIDE; Q2W6V3; -.
DR EnsemblBacteria; BAE50422; BAE50422; amb1618.
DR KEGG; mag:amb1618; -.
DR HOGENOM; CLU_036856_0_1_5; -.
DR OMA; ISDHRVG; -.
DR OrthoDB; 928964at2; -.
DR Proteomes; UP000007058; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016149; F:translation release factor activity, codon specific; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00093; Rel_fac_1; 1.
DR InterPro; IPR005139; PCRF.
DR InterPro; IPR000352; Pep_chain_release_fac_I.
DR InterPro; IPR045853; Pep_chain_release_fac_I_sf.
DR InterPro; IPR004373; RF-1.
DR Pfam; PF03462; PCRF; 1.
DR Pfam; PF00472; RF-1; 1.
DR SMART; SM00937; PCRF; 1.
DR SUPFAM; SSF75620; SSF75620; 1.
DR TIGRFAMs; TIGR00019; prfA; 1.
DR PROSITE; PS00745; RF_PROK_I; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Methylation; Protein biosynthesis; Reference proteome.
FT CHAIN 1..354
FT /note="Peptide chain release factor 1"
FT /id="PRO_0000263293"
FT REGION 283..308
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 231
FT /note="N5-methylglutamine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00093"
SQ SEQUENCE 354 AA; 39538 MW; DCE9A96E78D04A34 CRC64;
MNLETQFDKV LYRHDEVRAQ LSSGEGMDSQ TIQRLSKELS ELDPVVTAVQ AFRKAREDMV
QAAEMMNDPD MKDLAEEEFY ALKERLPALE REVQIMLLPK DEADEKNAII EVRAGTGGEE
AALFAAELFR MYERYAGLHG WRFEVMDVND TGIGGVKEAS ATITGRNVFA RLKFESGVHR
VQRVPATESQ GRIHTSAATV AIMPEAEEVD IQLNDSDLRF DVYRSQGSGG QSVNTTDSAV
RVTHIPTGLA VACQQEKSQH KNKATALKLL RARLYERERS AKDAERAAAR KSQVGSGDRS
ERIRTYNFPQ GRVTDHRINM TLYKIDAVMS GDALDELVEA LVAADQAERL AEME