RF1_NOCFA
ID RF1_NOCFA Reviewed; 356 AA.
AC Q5Z0Z2;
DT 15-MAR-2005, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 25-MAY-2022, entry version 97.
DE RecName: Full=Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093};
DE Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};
GN Name=prfA {ECO:0000255|HAMAP-Rule:MF_00093}; OrderedLocusNames=NFA_10540;
OS Nocardia farcinica (strain IFM 10152).
OC Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.
OX NCBI_TaxID=247156;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IFM 10152;
RX PubMed=15466710; DOI=10.1073/pnas.0406410101;
RA Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K.,
RA Shiba T., Hattori M.;
RT "The complete genomic sequence of Nocardia farcinica IFM 10152.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004).
CC -!- FUNCTION: Peptide chain release factor 1 directs the termination of
CC translation in response to the peptide chain termination codons UAG and
CC UAA. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- PTM: Methylated by PrmC. Methylation increases the termination
CC efficiency of RF1. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SIMILARITY: Belongs to the prokaryotic/mitochondrial release factor
CC family. {ECO:0000255|HAMAP-Rule:MF_00093}.
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DR EMBL; AP006618; BAD55899.1; -; Genomic_DNA.
DR RefSeq; WP_011207584.1; NC_006361.1.
DR AlphaFoldDB; Q5Z0Z2; -.
DR SMR; Q5Z0Z2; -.
DR STRING; 247156.NFA_10540; -.
DR PRIDE; Q5Z0Z2; -.
DR EnsemblBacteria; BAD55899; BAD55899; NFA_10540.
DR GeneID; 61131876; -.
DR KEGG; nfa:NFA_10540; -.
DR eggNOG; COG0216; Bacteria.
DR HOGENOM; CLU_036856_0_1_11; -.
DR OMA; ISDHRVG; -.
DR Proteomes; UP000006820; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016149; F:translation release factor activity, codon specific; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00093; Rel_fac_1; 1.
DR InterPro; IPR005139; PCRF.
DR InterPro; IPR000352; Pep_chain_release_fac_I.
DR InterPro; IPR045853; Pep_chain_release_fac_I_sf.
DR InterPro; IPR004373; RF-1.
DR Pfam; PF03462; PCRF; 1.
DR Pfam; PF00472; RF-1; 1.
DR SMART; SM00937; PCRF; 1.
DR SUPFAM; SSF75620; SSF75620; 1.
DR TIGRFAMs; TIGR00019; prfA; 1.
DR PROSITE; PS00745; RF_PROK_I; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Methylation; Protein biosynthesis; Reference proteome.
FT CHAIN 1..356
FT /note="Peptide chain release factor 1"
FT /id="PRO_0000177716"
FT MOD_RES 235
FT /note="N5-methylglutamine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00093"
SQ SEQUENCE 356 AA; 39024 MW; 8980B6EC6F8F61B7 CRC64;
MTQPSAIDDI LAEHAGLETQ LADPTLHNDP SAARRVGKRF AELAPIMATY RKLESARADL
TAARELAADD ASFAAEVPEL ERQVDELEQA LADLLAPRDP HDGDDVVLEV KSGEGGEESA
LFAADLARMY MRYAERRGWR VEVLDATVSD LGGYKEATLS IKSRDAARDG VWSRFKFEGG
VHRVQRVPVT ESQGRIHTSA AGVLIYPEPD EVAEVQIDES DLRIDVYRSS GKGGQGVNTT
DSAVRITHLP TGIVVTCQNE RSQLQNKARA MQVLAARLQA LAEEQAEQEA AAGRASQIRT
VDRSERIRTY NFPENRITDH RIGYKSHNLD AVLDGDLDAL LDALGKADRE ARMAAE