RF1_PARD8
ID RF1_PARD8 Reviewed; 369 AA.
AC A6LDR9;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 24-JUL-2007, sequence version 1.
DT 03-AUG-2022, entry version 74.
DE RecName: Full=Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093};
DE Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};
GN Name=prfA {ECO:0000255|HAMAP-Rule:MF_00093}; OrderedLocusNames=BDI_2102;
OS Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / CIP 104284 / JCM
OS 5825 / NCTC 11152).
OC Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Tannerellaceae;
OC Parabacteroides.
OX NCBI_TaxID=435591;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 8503 / DSM 20701 / CIP 104284 / JCM 5825 / NCTC 11152;
RX PubMed=17579514; DOI=10.1371/journal.pbio.0050156;
RA Xu J., Mahowald M.A., Ley R.E., Lozupone C.A., Hamady M., Martens E.C.,
RA Henrissat B., Coutinho P.M., Minx P., Latreille P., Cordum H.,
RA Van Brunt A., Kim K., Fulton R.S., Fulton L.A., Clifton S.W., Wilson R.K.,
RA Knight R.D., Gordon J.I.;
RT "Evolution of symbiotic bacteria in the distal human intestine.";
RL PLoS Biol. 5:1574-1586(2007).
CC -!- FUNCTION: Peptide chain release factor 1 directs the termination of
CC translation in response to the peptide chain termination codons UAG and
CC UAA. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- PTM: Methylated by PrmC. Methylation increases the termination
CC efficiency of RF1. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SIMILARITY: Belongs to the prokaryotic/mitochondrial release factor
CC family. {ECO:0000255|HAMAP-Rule:MF_00093}.
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DR EMBL; CP000140; ABR43833.1; -; Genomic_DNA.
DR RefSeq; WP_005854384.1; NC_009615.1.
DR AlphaFoldDB; A6LDR9; -.
DR SMR; A6LDR9; -.
DR STRING; 435591.BDI_2102; -.
DR EnsemblBacteria; ABR43833; ABR43833; BDI_2102.
DR GeneID; 57235009; -.
DR KEGG; pdi:BDI_2102; -.
DR eggNOG; COG0216; Bacteria.
DR HOGENOM; CLU_036856_0_1_10; -.
DR OMA; ISDHRVG; -.
DR OrthoDB; 928964at2; -.
DR BioCyc; PDIS435591:G1G5A-2157-MON; -.
DR Proteomes; UP000000566; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016149; F:translation release factor activity, codon specific; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00093; Rel_fac_1; 1.
DR InterPro; IPR005139; PCRF.
DR InterPro; IPR000352; Pep_chain_release_fac_I.
DR InterPro; IPR045853; Pep_chain_release_fac_I_sf.
DR InterPro; IPR004373; RF-1.
DR Pfam; PF03462; PCRF; 1.
DR Pfam; PF00472; RF-1; 1.
DR SMART; SM00937; PCRF; 1.
DR SUPFAM; SSF75620; SSF75620; 1.
DR TIGRFAMs; TIGR00019; prfA; 1.
DR PROSITE; PS00745; RF_PROK_I; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Methylation; Protein biosynthesis; Reference proteome.
FT CHAIN 1..369
FT /note="Peptide chain release factor 1"
FT /id="PRO_1000004926"
FT MOD_RES 238
FT /note="N5-methylglutamine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00093"
SQ SEQUENCE 369 AA; 41607 MW; E86AE0C5F543176D CRC64;
MAENSLLGKL DGLVSRFEEV GTLITDPAVI ADMKRFVKLN KEYRDLEKIV GARSEYVKVL
NGIEEAKALL ESEQDPEMRE MAREELDTCN ERIPALEEEI KLLLVPADPQ DDKNAIVEIR
GGTGGDEAAL FAGDLYRMYV KYCELKGWKI SVSSFSEGSS GGFKEIIFTV SGEKVYGTLK
YESGVHRVQR VPATETQGRV HTSAATVAVL PEADEFDVEI NEGEIKWDTF RSGGAGGQNV
NKVESGVRLR YVWKNPITGV SEEILIECTE TRDQPKNKER ALTRLRSFIY DKEHQKYLDD
IASKRKTMVS TGDRSAKIRT YNYPQGRITD HRINYTIYNL SAFMDGEIQD CLDHLIVAEN
AERLKESEL