RF1_PROM1
ID RF1_PROM1 Reviewed; 365 AA.
AC A2C4X1;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 20-FEB-2007, sequence version 1.
DT 25-MAY-2022, entry version 78.
DE RecName: Full=Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093};
DE Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};
GN Name=prfA {ECO:0000255|HAMAP-Rule:MF_00093}; OrderedLocusNames=NATL1_19751;
OS Prochlorococcus marinus (strain NATL1A).
OC Bacteria; Cyanobacteria; Synechococcales; Prochlorococcaceae;
OC Prochlorococcus.
OX NCBI_TaxID=167555;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NATL1A;
RX PubMed=18159947; DOI=10.1371/journal.pgen.0030231;
RA Kettler G.C., Martiny A.C., Huang K., Zucker J., Coleman M.L., Rodrigue S.,
RA Chen F., Lapidus A., Ferriera S., Johnson J., Steglich C., Church G.M.,
RA Richardson P., Chisholm S.W.;
RT "Patterns and implications of gene gain and loss in the evolution of
RT Prochlorococcus.";
RL PLoS Genet. 3:2515-2528(2007).
CC -!- FUNCTION: Peptide chain release factor 1 directs the termination of
CC translation in response to the peptide chain termination codons UAG and
CC UAA. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- PTM: Methylated by PrmC. Methylation increases the termination
CC efficiency of RF1. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SIMILARITY: Belongs to the prokaryotic/mitochondrial release factor
CC family. {ECO:0000255|HAMAP-Rule:MF_00093}.
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DR EMBL; CP000553; ABM76531.1; -; Genomic_DNA.
DR RefSeq; WP_011824496.1; NC_008819.1.
DR AlphaFoldDB; A2C4X1; -.
DR SMR; A2C4X1; -.
DR STRING; 167555.NATL1_19751; -.
DR EnsemblBacteria; ABM76531; ABM76531; NATL1_19751.
DR KEGG; pme:NATL1_19751; -.
DR eggNOG; COG0216; Bacteria.
DR HOGENOM; CLU_036856_0_1_3; -.
DR OMA; ISDHRVG; -.
DR Proteomes; UP000002592; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016149; F:translation release factor activity, codon specific; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00093; Rel_fac_1; 1.
DR InterPro; IPR005139; PCRF.
DR InterPro; IPR000352; Pep_chain_release_fac_I.
DR InterPro; IPR045853; Pep_chain_release_fac_I_sf.
DR InterPro; IPR004373; RF-1.
DR Pfam; PF03462; PCRF; 1.
DR Pfam; PF00472; RF-1; 1.
DR SMART; SM00937; PCRF; 1.
DR SUPFAM; SSF75620; SSF75620; 1.
DR TIGRFAMs; TIGR00019; prfA; 1.
DR PROSITE; PS00745; RF_PROK_I; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Methylation; Protein biosynthesis.
FT CHAIN 1..365
FT /note="Peptide chain release factor 1"
FT /id="PRO_1000093486"
FT MOD_RES 239
FT /note="N5-methylglutamine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00093"
SQ SEQUENCE 365 AA; 40976 MW; BF3D0E7DE5329142 CRC64;
MDSSTLIKRL ETAKSSFQNL ELQLADPDVA SDPKQLETIA RERSRLEPLV NDYLKLQIIE
KECLEAKGLV KESRDDKEME LLAREELQNL ELSKNELIQK LTLALLPKDP RDERSVMLEI
RAGAGGNEAC LWAGDLARMY ERYGQKLGWN VKPISSTEAD MGGFREMIIS VKGESVYSQL
KFEAGVHRVQ RVPSTESQGR VHTSTATVAV MPEADPVEVK IESTDLEIST ARSGGAGGQN
VNKVETAIDL FHKPSGIRVF CTQERSQMQN RERAMEILRA KLLELEIAEA NAKERSARLS
QVGTGDRSEK IRTYNYKDNR TTDHRLGVNF PLEQVLSGQL EDVIGACIAE EQKRQMEELS
NQSED