RF1_PROM5
ID RF1_PROM5 Reviewed; 364 AA.
AC A2BYQ7;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 20-FEB-2007, sequence version 1.
DT 03-AUG-2022, entry version 79.
DE RecName: Full=Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093};
DE Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};
GN Name=prfA {ECO:0000255|HAMAP-Rule:MF_00093}; OrderedLocusNames=P9515_17111;
OS Prochlorococcus marinus (strain MIT 9515).
OC Bacteria; Cyanobacteria; Synechococcales; Prochlorococcaceae;
OC Prochlorococcus.
OX NCBI_TaxID=167542;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MIT 9515;
RX PubMed=18159947; DOI=10.1371/journal.pgen.0030231;
RA Kettler G.C., Martiny A.C., Huang K., Zucker J., Coleman M.L., Rodrigue S.,
RA Chen F., Lapidus A., Ferriera S., Johnson J., Steglich C., Church G.M.,
RA Richardson P., Chisholm S.W.;
RT "Patterns and implications of gene gain and loss in the evolution of
RT Prochlorococcus.";
RL PLoS Genet. 3:2515-2528(2007).
CC -!- FUNCTION: Peptide chain release factor 1 directs the termination of
CC translation in response to the peptide chain termination codons UAG and
CC UAA. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- PTM: Methylated by PrmC. Methylation increases the termination
CC efficiency of RF1. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SIMILARITY: Belongs to the prokaryotic/mitochondrial release factor
CC family. {ECO:0000255|HAMAP-Rule:MF_00093}.
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DR EMBL; CP000552; ABM72918.1; -; Genomic_DNA.
DR RefSeq; WP_011821010.1; NC_008817.1.
DR AlphaFoldDB; A2BYQ7; -.
DR SMR; A2BYQ7; -.
DR STRING; 167542.P9515_17111; -.
DR PRIDE; A2BYQ7; -.
DR EnsemblBacteria; ABM72918; ABM72918; P9515_17111.
DR KEGG; pmc:P9515_17111; -.
DR eggNOG; COG0216; Bacteria.
DR HOGENOM; CLU_036856_0_1_3; -.
DR OMA; ISDHRVG; -.
DR OrthoDB; 928964at2; -.
DR Proteomes; UP000001589; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016149; F:translation release factor activity, codon specific; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00093; Rel_fac_1; 1.
DR InterPro; IPR005139; PCRF.
DR InterPro; IPR000352; Pep_chain_release_fac_I.
DR InterPro; IPR045853; Pep_chain_release_fac_I_sf.
DR InterPro; IPR004373; RF-1.
DR Pfam; PF03462; PCRF; 1.
DR Pfam; PF00472; RF-1; 1.
DR SMART; SM00937; PCRF; 1.
DR SUPFAM; SSF75620; SSF75620; 1.
DR TIGRFAMs; TIGR00019; prfA; 1.
DR PROSITE; PS00745; RF_PROK_I; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Methylation; Protein biosynthesis.
FT CHAIN 1..364
FT /note="Peptide chain release factor 1"
FT /id="PRO_1000093489"
FT MOD_RES 239
FT /note="N5-methylglutamine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00093"
SQ SEQUENCE 364 AA; 40956 MW; F803C73645AB0407 CRC64;
MEYTTLIARL KTASKSFVNL EMQLADPDIA NNPKKLELIA KERAKLEPLV LDFNQLLDTD
KEIDDSRQLL KDNRNDKDME LLINEELCNL EVLKNSLIQK VTIALLPKDP RDERSVMLEI
RAGAGGNEAC IWAGDLARMY ERYGQKIGWS VKPISASESD MGGFKELVIS IKGDSVYSQL
KFEAGVHRVQ RVPATESQGR VHTSTATVAV MPEADPVEVK IDPSDLEIGT ARSGGAGGQN
VNKVETAIDL IHKPTGIRVF CTQERSQLQN RERAMEILRA KLYEIQLKEA NDKERSQRLM
QVGTGDRSEK IRTYNFKDNR TTDHRLGSNF ALEPILAGQL DEVIDACIAQ EQKRIMEDFN
ENEN