RF1_SYNP6
ID RF1_SYNP6 Reviewed; 368 AA.
AC Q5N0T6;
DT 12-DEC-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-2005, sequence version 1.
DT 25-MAY-2022, entry version 89.
DE RecName: Full=Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093};
DE Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};
GN Name=prfA {ECO:0000255|HAMAP-Rule:MF_00093}; OrderedLocusNames=syc1894_d;
OS Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis
OS nidulans).
OC Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus.
OX NCBI_TaxID=269084;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 27144 / PCC 6301 / SAUG 1402/1;
RX PubMed=17211581; DOI=10.1007/s11120-006-9122-4;
RA Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M.,
RA Kanehisa M., Omata T., Sugiura M., Sugita M.;
RT "Complete nucleotide sequence of the freshwater unicellular cyanobacterium
RT Synechococcus elongatus PCC 6301 chromosome: gene content and
RT organization.";
RL Photosyn. Res. 93:55-67(2007).
CC -!- FUNCTION: Peptide chain release factor 1 directs the termination of
CC translation in response to the peptide chain termination codons UAG and
CC UAA. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- PTM: Methylated by PrmC. Methylation increases the termination
CC efficiency of RF1. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SIMILARITY: Belongs to the prokaryotic/mitochondrial release factor
CC family. {ECO:0000255|HAMAP-Rule:MF_00093}.
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DR EMBL; AP008231; BAD80084.1; -; Genomic_DNA.
DR RefSeq; WP_011244204.1; NC_006576.1.
DR AlphaFoldDB; Q5N0T6; -.
DR SMR; Q5N0T6; -.
DR STRING; 269084.syc1894_d; -.
DR EnsemblBacteria; BAD80084; BAD80084; syc1894_d.
DR KEGG; syc:syc1894_d; -.
DR eggNOG; COG0216; Bacteria.
DR OMA; ISDHRVG; -.
DR Proteomes; UP000001175; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016149; F:translation release factor activity, codon specific; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00093; Rel_fac_1; 1.
DR InterPro; IPR005139; PCRF.
DR InterPro; IPR000352; Pep_chain_release_fac_I.
DR InterPro; IPR045853; Pep_chain_release_fac_I_sf.
DR InterPro; IPR004373; RF-1.
DR Pfam; PF03462; PCRF; 1.
DR Pfam; PF00472; RF-1; 1.
DR SMART; SM00937; PCRF; 1.
DR SUPFAM; SSF75620; SSF75620; 1.
DR TIGRFAMs; TIGR00019; prfA; 1.
DR PROSITE; PS00745; RF_PROK_I; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Methylation; Protein biosynthesis.
FT CHAIN 1..368
FT /note="Peptide chain release factor 1"
FT /id="PRO_0000263372"
FT MOD_RES 239
FT /note="N5-methylglutamine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00093"
SQ SEQUENCE 368 AA; 41575 MW; 235D529BBBD71004 CRC64;
MAEPYLIEKL QSVEQTFQDL TRRLADPEIA TDPREFQRVA RMRSSMEELV TTYEEWKQRD
AELKGAREIL RESSGDPELR EMAALEVNEL EALLVSLEER LKILLLPRDP NDDKNIMLEI
RAGTGGDEAS LWAGDLLRMY SRYAESQGWR VKLLSESTGE LGGYKEAILE IQGESVYSKL
KFEAGVHRVQ RVPATEAGGR VHTSTATVAI MPEVDEVEVS IDPKDIELTT ARSGGAGGQN
VNKVETAVDL FHKPTGIRIF CTEERSQLQN RERAMQILRA KLYEMKLQEQ QEAVSSMRRS
QVGTGSRSEK IRTYNYKDNR ATDHRLGLNF SLNPVLEGEI EEVIQACISK DQTEQLAQMA
QDQEAAKV