RF1_SYNR3
ID RF1_SYNR3 Reviewed; 364 AA.
AC A5GVY9;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 12-JUN-2007, sequence version 1.
DT 25-MAY-2022, entry version 73.
DE RecName: Full=Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093};
DE Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};
GN Name=prfA {ECO:0000255|HAMAP-Rule:MF_00093};
GN OrderedLocusNames=SynRCC307_2145;
OS Synechococcus sp. (strain RCC307).
OC Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus;
OC unclassified Synechococcus.
OX NCBI_TaxID=316278;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RCC307;
RG Genoscope;
RL Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Peptide chain release factor 1 directs the termination of
CC translation in response to the peptide chain termination codons UAG and
CC UAA. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- PTM: Methylated by PrmC. Methylation increases the termination
CC efficiency of RF1. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SIMILARITY: Belongs to the prokaryotic/mitochondrial release factor
CC family. {ECO:0000255|HAMAP-Rule:MF_00093}.
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DR EMBL; CT978603; CAK29048.1; -; Genomic_DNA.
DR RefSeq; WP_011936559.1; NC_009482.1.
DR AlphaFoldDB; A5GVY9; -.
DR SMR; A5GVY9; -.
DR STRING; 316278.SynRCC307_2145; -.
DR EnsemblBacteria; CAK29048; CAK29048; SynRCC307_2145.
DR KEGG; syr:SynRCC307_2145; -.
DR eggNOG; COG0216; Bacteria.
DR HOGENOM; CLU_036856_0_1_3; -.
DR OMA; ISDHRVG; -.
DR OrthoDB; 928964at2; -.
DR Proteomes; UP000001115; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016149; F:translation release factor activity, codon specific; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00093; Rel_fac_1; 1.
DR InterPro; IPR005139; PCRF.
DR InterPro; IPR000352; Pep_chain_release_fac_I.
DR InterPro; IPR045853; Pep_chain_release_fac_I_sf.
DR InterPro; IPR004373; RF-1.
DR Pfam; PF03462; PCRF; 1.
DR Pfam; PF00472; RF-1; 1.
DR SMART; SM00937; PCRF; 1.
DR SUPFAM; SSF75620; SSF75620; 1.
DR TIGRFAMs; TIGR00019; prfA; 1.
DR PROSITE; PS00745; RF_PROK_I; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Methylation; Protein biosynthesis; Reference proteome.
FT CHAIN 1..364
FT /note="Peptide chain release factor 1"
FT /id="PRO_1000004963"
FT REGION 292..326
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 303..326
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 239
FT /note="N5-methylglutamine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00093"
SQ SEQUENCE 364 AA; 40357 MW; C277A99397377D6F CRC64;
MDQSFVTERL EATCRTFNAL ERQLADPSVA ADPEQLLTLA KERSRLEPLV LDYQRLQQLH
AEHQQAQQLL KESKGDAELE ALAQEELQQL SSEQEQLNQR LKVALLPSDP RDERSVMLEI
RAGAGGDEAC LWAGDLARMY ERHAQTCGWQ VNPVSASEAE LGGFKELILA IRGDAVFSQL
KYEAGVHRVQ RVPATESQGR VHTSTATVAV MPEADPVDVQ IDPKDLDIST ARSGGAGGQN
VNKVETAVDL LHKPTGIRVF CTQERSQLQN RERAMEILRA KLLAKEEEEA AAAESSARRA
QVGSGDRSEK IRTYNYKDNR TTDHRLGKNF PLETVLNGQL SDLIEACTHA DQQQKLEELA
ASES