RF1_TREPA
ID RF1_TREPA Reviewed; 351 AA.
AC O83090;
DT 15-DEC-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1998, sequence version 1.
DT 25-MAY-2022, entry version 124.
DE RecName: Full=Peptide chain release factor 1;
DE Short=RF-1;
GN Name=prfA; OrderedLocusNames=TP_0051;
OS Treponema pallidum (strain Nichols).
OC Bacteria; Spirochaetes; Spirochaetales; Treponemataceae; Treponema.
OX NCBI_TaxID=243276;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Nichols;
RX PubMed=9665876; DOI=10.1126/science.281.5375.375;
RA Fraser C.M., Norris S.J., Weinstock G.M., White O., Sutton G.G.,
RA Dodson R.J., Gwinn M.L., Hickey E.K., Clayton R.A., Ketchum K.A.,
RA Sodergren E., Hardham J.M., McLeod M.P., Salzberg S.L., Peterson J.D.,
RA Khalak H.G., Richardson D.L., Howell J.K., Chidambaram M., Utterback T.R.,
RA McDonald L.A., Artiach P., Bowman C., Cotton M.D., Fujii C., Garland S.A.,
RA Hatch B., Horst K., Roberts K.M., Sandusky M., Weidman J.F., Smith H.O.,
RA Venter J.C.;
RT "Complete genome sequence of Treponema pallidum, the syphilis spirochete.";
RL Science 281:375-388(1998).
CC -!- FUNCTION: Peptide chain release factor 1 directs the termination of
CC translation in response to the peptide chain termination codons UAG and
CC UAA. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- PTM: Methylated by PrmC. Methylation increases the termination
CC efficiency of RF1 (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the prokaryotic/mitochondrial release factor
CC family. {ECO:0000305}.
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DR EMBL; AE000520; AAC65047.1; -; Genomic_DNA.
DR PIR; E71372; E71372.
DR RefSeq; WP_010881500.1; NC_021490.2.
DR AlphaFoldDB; O83090; -.
DR SMR; O83090; -.
DR IntAct; O83090; 3.
DR STRING; 243276.TPANIC_0051; -.
DR EnsemblBacteria; AAC65047; AAC65047; TP_0051.
DR KEGG; tpa:TP_0051; -.
DR eggNOG; COG0216; Bacteria.
DR HOGENOM; CLU_036856_0_1_12; -.
DR OMA; ISDHRVG; -.
DR OrthoDB; 928964at2; -.
DR Proteomes; UP000000811; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016149; F:translation release factor activity, codon specific; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00093; Rel_fac_1; 1.
DR InterPro; IPR005139; PCRF.
DR InterPro; IPR000352; Pep_chain_release_fac_I.
DR InterPro; IPR045853; Pep_chain_release_fac_I_sf.
DR InterPro; IPR004373; RF-1.
DR Pfam; PF03462; PCRF; 1.
DR Pfam; PF00472; RF-1; 1.
DR SMART; SM00937; PCRF; 1.
DR SUPFAM; SSF75620; SSF75620; 1.
DR TIGRFAMs; TIGR00019; prfA; 1.
DR PROSITE; PS00745; RF_PROK_I; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Methylation; Protein biosynthesis; Reference proteome.
FT CHAIN 1..351
FT /note="Peptide chain release factor 1"
FT /id="PRO_0000177764"
FT MOD_RES 233
FT /note="N5-methylglutamine"
FT /evidence="ECO:0000250"
SQ SEQUENCE 351 AA; 40194 MW; 6993C6F883B5797C CRC64;
MIEKLEELRA QWRKLQQEVE NPSLFSSTQS YRERMRDHAY LSRLMEEYDR YLLTEKQLED
AHVLIQDESD ADFKDVIRQE IRTLEAALHT SQKRLKTLLI PPDSLQEKNI IMEIRGGTGG
DEAALFAADL FRMYTHYAES KQWRYEVLAV SETELGGFKE ITFSISGRDV YGSLRYESGV
HRVQRVPSTE ASGRIHTSAV TVAVLPEMEE TEVDIRAEDV RVDVMRASGP GGQCVNTTDS
AVRLTHLPTG IVVVCQDEKS QIKNKAKAMR VLRSRVYDLE ESKRQVARAR ERKSQVGSGD
RSERIRTYNF PQNRVTDHRV RVTLYKLDAV MQGALDDIIE PLCIASRESV I