RF1_VIBC1
ID RF1_VIBC1 Reviewed; 362 AA.
AC A7MY68;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 02-OCT-2007, sequence version 1.
DT 03-AUG-2022, entry version 82.
DE RecName: Full=Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093};
DE Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};
GN Name=prfA {ECO:0000255|HAMAP-Rule:MF_00093};
GN OrderedLocusNames=VIBHAR_01250;
OS Vibrio campbellii (strain ATCC BAA-1116).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=2902295;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-1116 / BB120;
RG The Vibrio harveyi Genome Sequencing Project;
RA Bassler B., Clifton S.W., Fulton L., Delehaunty K., Fronick C.,
RA Harrison M., Markivic C., Fulton R., Tin-Wollam A.-M., Shah N., Pepin K.,
RA Nash W., Thiruvilangam P., Bhonagiri V., Waters C., Tu K.C., Irgon J.,
RA Wilson R.K.;
RL Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Peptide chain release factor 1 directs the termination of
CC translation in response to the peptide chain termination codons UAG and
CC UAA. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- PTM: Methylated by PrmC. Methylation increases the termination
CC efficiency of RF1. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SIMILARITY: Belongs to the prokaryotic/mitochondrial release factor
CC family. {ECO:0000255|HAMAP-Rule:MF_00093}.
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DR EMBL; CP000789; ABU70229.1; -; Genomic_DNA.
DR RefSeq; WP_012127201.1; NC_022269.1.
DR AlphaFoldDB; A7MY68; -.
DR SMR; A7MY68; -.
DR EnsemblBacteria; ABU70229; ABU70229; VIBHAR_01250.
DR GeneID; 67378158; -.
DR KEGG; vha:VIBHAR_01250; -.
DR PATRIC; fig|338187.25.peg.1392; -.
DR OMA; ISDHRVG; -.
DR OrthoDB; 928964at2; -.
DR Proteomes; UP000008152; Chromosome I.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016149; F:translation release factor activity, codon specific; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00093; Rel_fac_1; 1.
DR InterPro; IPR005139; PCRF.
DR InterPro; IPR000352; Pep_chain_release_fac_I.
DR InterPro; IPR045853; Pep_chain_release_fac_I_sf.
DR InterPro; IPR004373; RF-1.
DR Pfam; PF03462; PCRF; 1.
DR Pfam; PF00472; RF-1; 1.
DR SMART; SM00937; PCRF; 1.
DR SUPFAM; SSF75620; SSF75620; 1.
DR TIGRFAMs; TIGR00019; prfA; 1.
DR PROSITE; PS00745; RF_PROK_I; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Methylation; Protein biosynthesis.
FT CHAIN 1..362
FT /note="Peptide chain release factor 1"
FT /id="PRO_1000004966"
FT MOD_RES 237
FT /note="N5-methylglutamine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00093"
SQ SEQUENCE 362 AA; 40296 MW; 2BCC25B0062ECBA5 CRC64;
MKASILTKLE TLVERYEEVQ HLLGDPDVIG NQDKFRALSK EYSQLEEVTK CFQAYQQAQD
DLAAAEDMAN EDDEEMREMA QEEIKEAKEA IERLTDELQI LLLPKDPNDD RNCFLEIRAG
AGGDEAGIFA GDLFRMYSKY AEKRGWRIEV MSSNEAEHGG YKEMIAKVSG DGAYGVLKFE
SGGHRVQRVP ATESQGRVHT SACTVAVMAE IPEADLPEIK AADLKIDTFR ASGAGGQHVN
TTDSAIRITH LPTGTVVECQ DERSQHKNKA KAMAVLAARI VQAEEERRAA EVSDTRRNLL
GSGDRSDRIR TYNYPQGRVS DHRINLTIYR LNEVMEGDLQ SLIDPVVQEH QADQLAALAE
NG