RF1_YERPA
ID RF1_YERPA Reviewed; 360 AA.
AC Q1C854;
DT 12-DEC-2006, integrated into UniProtKB/Swiss-Prot.
DT 11-JUL-2006, sequence version 1.
DT 25-MAY-2022, entry version 84.
DE RecName: Full=Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093};
DE Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};
GN Name=prfA {ECO:0000255|HAMAP-Rule:MF_00093}; OrderedLocusNames=YPA_1401;
OS Yersinia pestis bv. Antiqua (strain Antiqua).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Yersiniaceae; Yersinia.
OX NCBI_TaxID=360102;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Antiqua;
RX PubMed=16740952; DOI=10.1128/jb.00124-06;
RA Chain P.S.G., Hu P., Malfatti S.A., Radnedge L., Larimer F., Vergez L.M.,
RA Worsham P., Chu M.C., Andersen G.L.;
RT "Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516:
RT evidence of gene reduction in an emerging pathogen.";
RL J. Bacteriol. 188:4453-4463(2006).
CC -!- FUNCTION: Peptide chain release factor 1 directs the termination of
CC translation in response to the peptide chain termination codons UAG and
CC UAA. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- PTM: Methylated by PrmC. Methylation increases the termination
CC efficiency of RF1. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC -!- SIMILARITY: Belongs to the prokaryotic/mitochondrial release factor
CC family. {ECO:0000255|HAMAP-Rule:MF_00093}.
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DR EMBL; CP000308; ABG13368.1; -; Genomic_DNA.
DR RefSeq; WP_002211236.1; NZ_CP009906.1.
DR AlphaFoldDB; Q1C854; -.
DR SMR; Q1C854; -.
DR EnsemblBacteria; ABG13368; ABG13368; YPA_1401.
DR GeneID; 57976644; -.
DR KEGG; ypa:YPA_1401; -.
DR OMA; ISDHRVG; -.
DR Proteomes; UP000001971; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016149; F:translation release factor activity, codon specific; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00093; Rel_fac_1; 1.
DR InterPro; IPR005139; PCRF.
DR InterPro; IPR000352; Pep_chain_release_fac_I.
DR InterPro; IPR045853; Pep_chain_release_fac_I_sf.
DR InterPro; IPR004373; RF-1.
DR Pfam; PF03462; PCRF; 1.
DR Pfam; PF00472; RF-1; 1.
DR SMART; SM00937; PCRF; 1.
DR SUPFAM; SSF75620; SSF75620; 1.
DR TIGRFAMs; TIGR00019; prfA; 1.
DR PROSITE; PS00745; RF_PROK_I; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Methylation; Protein biosynthesis.
FT CHAIN 1..360
FT /note="Peptide chain release factor 1"
FT /id="PRO_0000263395"
FT REGION 291..312
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 235
FT /note="N5-methylglutamine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00093"
SQ SEQUENCE 360 AA; 40564 MW; 6C3F8538963AABBD CRC64;
MKSSIVAKLE ALQERHEEVL AYLGDASVIA DQDRFRALSR EYAQLTDVTR CFKEWRSAQD
DIEAAEMMLD DLEMREMAQE ELKIAKARSE ELEQQLQVLL LPKDPDDERD CFLEIRAGTG
GDEAAIFAGD MFRMYSRYAE TRRWKVEIMS ASEGEHGGYK EIIAKISGDG VFGQLKFESG
GHRVQRVPET ESQGRIHTSA CTVAVMPAIP EAELPEINAG DLRIDTFRSS GAGGQHVNTT
DSAIRITHIP TGIVVECQDE RSQHKNKAKA MSVLGARIRA AEMQKRQLAE ASERRNLLGT
GDRSDRNRTY NFPQGRVTDH RINLTLYRLD EVMEGKLDML IQPIVQEYQA DQLSALSEQD