RF3_DICNO
ID RF3_DICNO Reviewed; 531 AA.
AC P39883;
DT 01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1995, sequence version 1.
DT 03-AUG-2022, entry version 101.
DE RecName: Full=Peptide chain release factor 3;
DE Short=RF-3;
GN Name=prfC;
OS Dichelobacter nodosus (Bacteroides nodosus).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales;
OC Cardiobacteriaceae; Dichelobacter.
OX NCBI_TaxID=870;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=A198;
RX PubMed=7539688; DOI=10.1099/13500872-141-4-945;
RA Billington S.J., Jost B.H., Rood J.I.;
RT "A gene region in Dichelobacter nodosus encoding a lipopolysaccharide
RT epitope.";
RL Microbiology 141:945-957(1995).
CC -!- FUNCTION: Increases the formation of ribosomal termination complexes
CC and stimulates activities of RF-1 and RF-2. It binds guanine
CC nucleotides but is not codon-specific. It may interact directly with
CC the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced
CC by GTP and GDP, but not by GMP (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Classic translation factor GTPase family. PrfC subfamily.
CC {ECO:0000305}.
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DR EMBL; U06471; AAC43387.1; -; Genomic_DNA.
DR RefSeq; WP_012030836.1; NZ_SRJB01000010.1.
DR AlphaFoldDB; P39883; -.
DR SMR; P39883; -.
DR PRIDE; P39883; -.
DR PATRIC; fig|870.4.peg.879; -.
DR OMA; GFVFKIH; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR GO; GO:0016149; F:translation release factor activity, codon specific; IEA:UniProtKB-UniRule.
DR GO; GO:0006449; P:regulation of translational termination; IEA:UniProtKB-UniRule.
DR CDD; cd04169; RF3; 1.
DR Gene3D; 3.30.70.3280; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_00072; Rel_fac_3; 1.
DR InterPro; IPR035647; EFG_III/V.
DR InterPro; IPR004161; EFTu-like_2.
DR InterPro; IPR031157; G_TR_CS.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR004548; PrfC.
DR InterPro; IPR032090; RF3_C.
DR InterPro; IPR038467; RF3_dom_3_sf.
DR InterPro; IPR041732; RF3_GTP-bd.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR43556; PTHR43556; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF03144; GTP_EFTU_D2; 1.
DR Pfam; PF16658; RF3_C; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50447; SSF50447; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR SUPFAM; SSF54980; SSF54980; 1.
DR TIGRFAMs; TIGR00503; prfC; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS00301; G_TR_1; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; GTP-binding; Nucleotide-binding; Protein biosynthesis.
FT CHAIN 1..531
FT /note="Peptide chain release factor 3"
FT /id="PRO_0000210929"
FT DOMAIN 10..279
FT /note="tr-type G"
FT BINDING 19..26
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
FT BINDING 87..91
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
FT BINDING 141..144
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
SQ SEQUENCE 531 AA; 59960 MW; 82E55EADB0178877 CRC64;
MSDILSQDWR DRRTFAIISH PDAGKTTLTE KLLLFGGAIA LAGAVKGRKA AHHATSDWMK
MEQERGISVT SSVMQFPYHG KVINLLDTPG HEDFSEDTYR TLTAVDSALM VIDCAKGVEE
RTIKLMEVCR LRTTPIFTFV NKLDRDGREP MEILDEIERV LHIQCAPVTW PIGMGRSLKG
IYHLARDTVY FYTTGKGGAS INHGETVVGL DNPRLDTLLP DIIDDFREEI HFLREVGNPF
DHEAYLRGEL TPVYFGSAIS NFGVEEMLTD FAQLAPPPRP HRTTEREVAP QEEKLTGFVF
KIQANMDLKH RDRIAFMRVN SGTFRAGMKL WQVRLGREVK IPDALTFLAA EREHAQEAFA
GDIIGIHNHG TIRIGDTFTE GESLQFTGIP DFAPELFRRV QLKDPLKMKA LLKGLAQLCE
EGATQFFKPL IGSDLILGAI GVLQFEVVQQ RLETEYNVKC QFESVAVATA RWIEAPNDKA
LKQFIDKNQA NLAHDHYEQL VYIAPSRVNL QLTQERFPDI VFSQTRDHLA Q