RFBJ_YERPU
ID RFBJ_YERPU Reviewed; 283 AA.
AC Q05342;
DT 16-OCT-2013, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 03-AUG-2022, entry version 77.
DE RecName: Full=CDP-abequose synthase;
DE EC=1.1.1.341;
GN Name=rfbJ; Synonyms=abe;
OS Yersinia pseudotuberculosis.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Yersiniaceae; Yersinia.
OX NCBI_TaxID=633;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND CATALYTIC ACTIVITY.
RX PubMed=8444803; DOI=10.1128/jb.175.5.1412-1422.1993;
RA Kessler A.C., Haase A., Reeves P.R.;
RT "Molecular analysis of the 3,6-dideoxyhexose pathway genes of Yersinia
RT pseudotuberculosis serogroup IIA.";
RL J. Bacteriol. 175:1412-1422(1993).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=8541300; DOI=10.1016/0304-4165(95)00126-3;
RA Hobbs M., Reeves P.R.;
RT "Genetic organisation and evolution of Yersinia pseudotuberculosis 3,6-
RT dideoxyhexose biosynthetic genes.";
RL Biochim. Biophys. Acta 1245:273-277(1995).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=12011023; DOI=10.1128/iai.70.6.3271-3276.2002;
RA Pacinelli E., Wang L., Reeves P.R.;
RT "Relationship of Yersinia pseudotuberculosis O antigens IA, IIA, and IVB:
RT the IIA gene cluster was derived from that of IVB.";
RL Infect. Immun. 70:3271-3276(2002).
RN [4]
RP IDENTIFICATION, AND FUNCTION.
RX PubMed=1724263; DOI=10.1099/00221287-137-12-2689;
RA Kessler A.C., Brown P.K., Romana L.K., Reeves P.R.;
RT "Molecular cloning and genetic characterization of the rfb region from
RT Yersinia pseudotuberculosis serogroup IIA, which determines the formation
RT of the 3,6-dideoxyhexose abequose.";
RL J. Gen. Microbiol. 137:2689-2695(1991).
CC -!- FUNCTION: The CDP-abequose synthase is involved in lipopolysaccharides
CC (LPS) synthesis containing abequose which are important antigens of the
CC cell surface responsible for the serological O specificity. Derivatives
CC of the 3,6-dideoxyhexose group have a particular highly immunogenic
CC character. {ECO:0000269|PubMed:1724263}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=CDP-alpha-D-abequose + NADP(+) = CDP-4-dehydro-3,6-dideoxy-
CC alpha-D-glucose + H(+) + NADPH; Xref=Rhea:RHEA:34563,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:57783, ChEBI:CHEBI:58349,
CC ChEBI:CHEBI:70783, ChEBI:CHEBI:70784; EC=1.1.1.341;
CC Evidence={ECO:0000269|PubMed:8444803};
CC -!- PATHWAY: Bacterial outer membrane biogenesis; LPS O-antigen
CC biosynthesis.
CC -!- SIMILARITY: Belongs to the NAD(P)-dependent epimerase/dehydratase
CC family. {ECO:0000305}.
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DR EMBL; AF461770; AAB49402.1; -; Genomic_DNA.
DR PIR; F47070; F47070.
DR RefSeq; WP_038400274.1; NZ_UHJE01000001.1.
DR AlphaFoldDB; Q05342; -.
DR SMR; Q05342; -.
DR STRING; 633.DJ40_1357; -.
DR KEGG; ag:AAB49402; -.
DR KEGG; ypq:DJ40_1357; -.
DR KEGG; ypr:BZ20_1044; -.
DR PATRIC; fig|633.44.peg.1459; -.
DR eggNOG; COG0451; Bacteria.
DR BRENDA; 1.1.1.341; 4560.
DR UniPathway; UPA00281; -.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
DR GO; GO:0009243; P:O antigen biosynthetic process; IEA:UniProtKB-UniPathway.
DR InterPro; IPR001509; Epimerase_deHydtase.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR Pfam; PF01370; Epimerase; 1.
DR SUPFAM; SSF51735; SSF51735; 1.
PE 1: Evidence at protein level;
KW Lipopolysaccharide biosynthesis; NADP; Oxidoreductase.
FT CHAIN 1..283
FT /note="CDP-abequose synthase"
FT /id="PRO_0000424185"
FT ACT_SITE 129
FT /note="Proton acceptor"
FT /evidence="ECO:0000250"
FT BINDING 7..13
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000250"
FT BINDING 48..49
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000250"
FT BINDING 129
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000250"
FT BINDING 133
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000250"
SQ SEQUENCE 283 AA; 32018 MW; 2A8E6D4C5AB3B6E3 CRC64;
MRIVLTGGSG YIGSSLTPVL IKKYGRVYNI GRNTISEVSI NGSKEYCEFT YESLFDSLVE
LSPDLVINLA AGYYNDSGAP DLNVIDGNLK IPFIILEYFK SCNYGRFINI GSYWEFSCSG
RGVKGVNPYG IIKSTVRRLL DYYSKYNVIY TNLILYGSYG DNDHRGKIVD CIIDAVNSNE
TLKLSPGEQK LNLVYIDDII EAILYIVSSD NGQYDNETLS IYTPTEHTVK EIVCFINEIK
DNNLSLGGGR YRNDEVMAPD YKYRNIFHAK DKLKEYITSK IKK