RFCL_METAC
ID RFCL_METAC Reviewed; 607 AA.
AC Q8TPU4;
DT 16-FEB-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2002, sequence version 1.
DT 03-AUG-2022, entry version 97.
DE RecName: Full=Replication factor C large subunit {ECO:0000255|HAMAP-Rule:MF_01508};
DE Short=RFC large subunit {ECO:0000255|HAMAP-Rule:MF_01508};
DE AltName: Full=Clamp loader large subunit {ECO:0000255|HAMAP-Rule:MF_01508};
GN Name=rfcL {ECO:0000255|HAMAP-Rule:MF_01508}; OrderedLocusNames=MA_1810;
OS Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
OS C2A).
OC Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC Methanosarcinales; Methanosarcinaceae; Methanosarcina.
OX NCBI_TaxID=188937;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 35395 / DSM 2834 / JCM 12185 / C2A;
RX PubMed=11932238; DOI=10.1101/gr.223902;
RA Galagan J.E., Nusbaum C., Roy A., Endrizzi M.G., Macdonald P., FitzHugh W.,
RA Calvo S., Engels R., Smirnov S., Atnoor D., Brown A., Allen N., Naylor J.,
RA Stange-Thomann N., DeArellano K., Johnson R., Linton L., McEwan P.,
RA McKernan K., Talamas J., Tirrell A., Ye W., Zimmer A., Barber R.D.,
RA Cann I., Graham D.E., Grahame D.A., Guss A.M., Hedderich R.,
RA Ingram-Smith C., Kuettner H.C., Krzycki J.A., Leigh J.A., Li W., Liu J.,
RA Mukhopadhyay B., Reeve J.N., Smith K., Springer T.A., Umayam L.A.,
RA White O., White R.H., de Macario E.C., Ferry J.G., Jarrell K.F., Jing H.,
RA Macario A.J.L., Paulsen I.T., Pritchett M., Sowers K.R., Swanson R.V.,
RA Zinder S.H., Lander E., Metcalf W.W., Birren B.;
RT "The genome of Methanosarcina acetivorans reveals extensive metabolic and
RT physiological diversity.";
RL Genome Res. 12:532-542(2002).
CC -!- FUNCTION: Part of the RFC clamp loader complex which loads the PCNA
CC sliding clamp onto DNA. {ECO:0000255|HAMAP-Rule:MF_01508}.
CC -!- SUBUNIT: Heteromultimer composed of small subunits (RfcS) and large
CC subunits (RfcL). {ECO:0000255|HAMAP-Rule:MF_01508}.
CC -!- SIMILARITY: Belongs to the activator 1 small subunits family. RfcL
CC subfamily. {ECO:0000255|HAMAP-Rule:MF_01508}.
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DR EMBL; AE010299; AAM05216.1; -; Genomic_DNA.
DR RefSeq; WP_011021813.1; NC_003552.1.
DR AlphaFoldDB; Q8TPU4; -.
DR SMR; Q8TPU4; -.
DR STRING; 188937.MA_1810; -.
DR PRIDE; Q8TPU4; -.
DR EnsemblBacteria; AAM05216; AAM05216; MA_1810.
DR GeneID; 1473699; -.
DR KEGG; mac:MA_1810; -.
DR HOGENOM; CLU_027255_0_0_2; -.
DR InParanoid; Q8TPU4; -.
DR OMA; GGWTRYG; -.
DR OrthoDB; 24257at2157; -.
DR PhylomeDB; Q8TPU4; -.
DR Proteomes; UP000002487; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003689; F:DNA clamp loader activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_01508; RfcL; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR023935; Rep_factor-C_lsu.
DR Pfam; PF00004; AAA; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; DNA replication; Nucleotide-binding; Reference proteome.
FT CHAIN 1..607
FT /note="Replication factor C large subunit"
FT /id="PRO_0000135951"
FT REGION 468..607
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 504..522
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 539..587
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 590..607
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 55..62
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01508"
SQ SEQUENCE 607 AA; 67637 MW; 03D4B450304968B1 CRC64;
MVWFKMMSAI EWAEKYRPRT LEDVVGNKKA VRDFRAWAEE WQSRIPETRA VILYGPAGIG
KTSSAHALAR DMDWDVIELN ASDQRTAGVI EKIAGSAASM NTLFGSKRLI ILDEADNIHG
TADRGGMRAI SGIIKGTLQP IVLIANDIYG LTPTIRNLCL EIKFGSVQSR SMVPALKKVC
GAEGVYCSQE ALLQIAENAG GDFRSAINDL QAAASGKEKL EVEDIGTAGR DVKENIFKAM
QKIFKSTDCK KALESAYGLD ESPEDLVHWI DENLPIQYAR KDGNLEDIKT GFGYLSKADL
YLGRVKKRQN YRMWRYASML MVCGAALSKT KPYPGFIKYQ QPSLWRRLGQ TRSKRDMRDN
IASKIGEHSF ESMHYSRNNL LGLYSRMLKD EESAVEVTAN LGLELEELMY LTGSAKASKK
LQKIYDKAQK LLEEGKNETA DPDFFKAPVP AVDNKQRTLS CPVIIQEEEE KPQKEGSAGK
SDPPGPHSSE RKQKTLNMGF DSLLETSEKK ENSEKKENSG YLLVDDPKPA EKNLFSFSPS
LLEKKNFSES VEQKTSSKPS KKGNPANNEP SKQKILDKVT PTESVQDNAG DGAKKAEPKN
QKTLFDF