RFCL_METBU
ID RFCL_METBU Reviewed; 497 AA.
AC Q12TX1;
DT 26-JUN-2007, integrated into UniProtKB/Swiss-Prot.
DT 22-AUG-2006, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=Replication factor C large subunit {ECO:0000255|HAMAP-Rule:MF_01508};
DE Short=RFC large subunit {ECO:0000255|HAMAP-Rule:MF_01508};
DE AltName: Full=Clamp loader large subunit {ECO:0000255|HAMAP-Rule:MF_01508};
GN Name=rfcL {ECO:0000255|HAMAP-Rule:MF_01508}; OrderedLocusNames=Mbur_2242;
OS Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 /
OS ACE-M).
OC Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC Methanosarcinales; Methanosarcinaceae; Methanococcoides.
OX NCBI_TaxID=259564;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 6242 / NBRC 107633 / OCM 468 / ACE-M;
RX PubMed=19404327; DOI=10.1038/ismej.2009.45;
RA Allen M.A., Lauro F.M., Williams T.J., Burg D., Siddiqui K.S.,
RA De Francisci D., Chong K.W., Pilak O., Chew H.H., De Maere M.Z., Ting L.,
RA Katrib M., Ng C., Sowers K.R., Galperin M.Y., Anderson I.J., Ivanova N.,
RA Dalin E., Martinez M., Lapidus A., Hauser L., Land M., Thomas T.,
RA Cavicchioli R.;
RT "The genome sequence of the psychrophilic archaeon, Methanococcoides
RT burtonii: the role of genome evolution in cold adaptation.";
RL ISME J. 3:1012-1035(2009).
CC -!- FUNCTION: Part of the RFC clamp loader complex which loads the PCNA
CC sliding clamp onto DNA. {ECO:0000255|HAMAP-Rule:MF_01508}.
CC -!- SUBUNIT: Heteromultimer composed of small subunits (RfcS) and large
CC subunits (RfcL). {ECO:0000255|HAMAP-Rule:MF_01508}.
CC -!- SIMILARITY: Belongs to the activator 1 small subunits family. RfcL
CC subfamily. {ECO:0000255|HAMAP-Rule:MF_01508}.
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DR EMBL; CP000300; ABE53105.1; -; Genomic_DNA.
DR RefSeq; WP_011500241.1; NC_007955.1.
DR AlphaFoldDB; Q12TX1; -.
DR SMR; Q12TX1; -.
DR STRING; 259564.Mbur_2242; -.
DR EnsemblBacteria; ABE53105; ABE53105; Mbur_2242.
DR GeneID; 3998854; -.
DR KEGG; mbu:Mbur_2242; -.
DR HOGENOM; CLU_027255_0_0_2; -.
DR OMA; GGWTRYG; -.
DR OrthoDB; 24257at2157; -.
DR Proteomes; UP000001979; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003689; F:DNA clamp loader activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_01508; RfcL; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR023935; Rep_factor-C_lsu.
DR Pfam; PF00004; AAA; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; DNA replication; Nucleotide-binding; Reference proteome.
FT CHAIN 1..497
FT /note="Replication factor C large subunit"
FT /id="PRO_0000292181"
FT REGION 428..497
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 428..453
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 466..480
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 50..57
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01508"
SQ SEQUENCE 497 AA; 55694 MW; 3E4933C17028D0CC CRC64;
MAESIEWVEK YRPQSLTDIV GNKKSVVDMR EWAQSWLSGT PEKRAIILHG PAGVGKTSAA
HALARDLDWE TIELNASDQR TAGVIERVAG SASKMSSLTG TTAKRLIILD EADNIHGNAD
RGGARAIGGI IKNTDQPIVL IANDLYGLTP SVRSLCIELK FNSVQGRSMI PAMKRICVEE
KIMCGVGVLE KLAESAGGDL RSAIKDLQAV ATGRDEIHIE DIATSERDTK ESIFKVLGKI
FKSTDPKKAL EATYGLDETP ENLIHWIDEN LPLQYGTEEG TQEDLITGYE YLAKADRYLG
RVRKRQSYRL WRYAGALMTC GTVVSKTHVG RGFTKYQPPS FWRKMGQLRA KRDMRDNIAS
KIADHANKSM RYSRTDLAHL YGRMLEENEY AADVTFDLEL SIDEMVYLTG KKKVTKDIQR
IHDLAQAKRR SLGRDEGKAF FEKKPKKQTP DKKQMDLTQI INSTPQEDKV EKKETENVPP
VKKSASKAKP QKTLFDF