RFCL_METMA
ID RFCL_METMA Reviewed; 610 AA.
AC Q8Q084;
DT 16-FEB-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2002, sequence version 1.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=Replication factor C large subunit {ECO:0000255|HAMAP-Rule:MF_01508};
DE Short=RFC large subunit {ECO:0000255|HAMAP-Rule:MF_01508};
DE AltName: Full=Clamp loader large subunit {ECO:0000255|HAMAP-Rule:MF_01508};
GN Name=rfcL {ECO:0000255|HAMAP-Rule:MF_01508}; OrderedLocusNames=MM_0253;
OS Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM
OS 11833 / OCM 88) (Methanosarcina frisia).
OC Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC Methanosarcinales; Methanosarcinaceae; Methanosarcina.
OX NCBI_TaxID=192952;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88;
RX PubMed=12125824;
RA Deppenmeier U., Johann A., Hartsch T., Merkl R., Schmitz R.A.,
RA Martinez-Arias R., Henne A., Wiezer A., Baeumer S., Jacobi C.,
RA Brueggemann H., Lienard T., Christmann A., Boemecke M., Steckel S.,
RA Bhattacharyya A., Lykidis A., Overbeek R., Klenk H.-P., Gunsalus R.P.,
RA Fritz H.-J., Gottschalk G.;
RT "The genome of Methanosarcina mazei: evidence for lateral gene transfer
RT between Bacteria and Archaea.";
RL J. Mol. Microbiol. Biotechnol. 4:453-461(2002).
CC -!- FUNCTION: Part of the RFC clamp loader complex which loads the PCNA
CC sliding clamp onto DNA. {ECO:0000255|HAMAP-Rule:MF_01508}.
CC -!- SUBUNIT: Heteromultimer composed of small subunits (RfcS) and large
CC subunits (RfcL). {ECO:0000255|HAMAP-Rule:MF_01508}.
CC -!- SIMILARITY: Belongs to the activator 1 small subunits family. RfcL
CC subfamily. {ECO:0000255|HAMAP-Rule:MF_01508}.
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DR EMBL; AE008384; AAM29949.1; -; Genomic_DNA.
DR AlphaFoldDB; Q8Q084; -.
DR SMR; Q8Q084; -.
DR STRING; 192952.MM_0253; -.
DR EnsemblBacteria; AAM29949; AAM29949; MM_0253.
DR KEGG; mma:MM_0253; -.
DR PATRIC; fig|192952.21.peg.307; -.
DR eggNOG; arCOG00470; Archaea.
DR HOGENOM; CLU_027255_0_0_2; -.
DR OMA; GGWTRYG; -.
DR Proteomes; UP000000595; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003689; F:DNA clamp loader activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_01508; RfcL; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR023935; Rep_factor-C_lsu.
DR Pfam; PF00004; AAA; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; DNA replication; Nucleotide-binding; Reference proteome.
FT CHAIN 1..610
FT /note="Replication factor C large subunit"
FT /id="PRO_0000135954"
FT REGION 467..610
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 490..514
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 593..610
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 55..62
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01508"
SQ SEQUENCE 610 AA; 67574 MW; 644639BEA1E0BB53 CRC64;
MVWFKMMSAI EWAEKYRPRT LGDVVGNRKA VQDLRKWAEE WQSGIPEKRA VILYGPAGIG
KTSSAHALAG DMEWEVIELN ASDQRTAGVI EKIAGSAASM NTFFGGKRLI ILDEADNLHG
TADRGGMRAI SGIIKSTLQP IILIANDIYG LTPTVRNICL EIKFGSVQSR SMVPALKKVC
ESEGVSCSQE AVLQIAENAG GDFRSAINDL QAAANGKKAL EAEDISTAGR DVKENIFKAM
QKIFKSTDCK RALESAYGLD ESPEDLVHWI DENLPIQYAR KDGDLEDIKT GFGYLSKADI
YLGRVKKRQN YRMWRYASML MVCGAALSKT RPYPGFIKYQ QPSLWRRLGQ TRSRRDMRDN
IASKIGEHSF ESMHYSRNNL LGFYSILLKD EASAVELTAN LGLELEELMY LSGSAKVSKK
LQKIYDEAQN LLETKRDRTE EQEFFKAPAP AADDKQATLH CPVNIPEKEG NASAEKPESP
GPQSPERKQK TLDLGFDTPQ KLPEKKRSSE MKLPENPEPA ENNLFSLSEP LPEKGPIPDF
AGKKSLPELE EEKPSLSPLK KMSPANKEAS KQGVKQGASE KGSPAADTQG GMEDGSKKAE
PKNQKTLFDF