RFT1_CAEEL
ID RFT1_CAEEL Reviewed; 522 AA.
AC Q23444; Q86DD6; U4PBU5;
DT 13-NOV-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 03-AUG-2022, entry version 122.
DE RecName: Full=Protein RFT1 homolog;
GN Name=rfth-1 {ECO:0000312|WormBase:ZK180.3a};
GN ORFNames=ZK180.3 {ECO:0000312|WormBase:ZK180.3a};
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- FUNCTION: May be involved in N-linked oligosaccharide assembly.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=3;
CC Name=a {ECO:0000312|WormBase:ZK180.3a};
CC IsoId=Q23444-1; Sequence=Displayed;
CC Name=b {ECO:0000312|WormBase:ZK180.3b};
CC IsoId=Q23444-2; Sequence=VSP_029511;
CC Name=c {ECO:0000312|WormBase:ZK180.3c};
CC IsoId=Q23444-3; Sequence=VSP_053991;
CC -!- SIMILARITY: Belongs to the RFT1 family. {ECO:0000305}.
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DR EMBL; BX284604; CCD73072.1; -; Genomic_DNA.
DR EMBL; BX284604; CCD73073.2; -; Genomic_DNA.
DR EMBL; BX284604; CDH93204.1; -; Genomic_DNA.
DR PIR; T29705; T29705.
DR RefSeq; NP_001023610.1; NM_001028439.3. [Q23444-1]
DR RefSeq; NP_001023611.2; NM_001028440.4.
DR RefSeq; NP_001294434.1; NM_001307505.1.
DR AlphaFoldDB; Q23444; -.
DR STRING; 6239.ZK180.3a; -.
DR EPD; Q23444; -.
DR PaxDb; Q23444; -.
DR PeptideAtlas; Q23444; -.
DR EnsemblMetazoa; ZK180.3a.1; ZK180.3a.1; WBGene00022677. [Q23444-1]
DR EnsemblMetazoa; ZK180.3b.1; ZK180.3b.1; WBGene00022677. [Q23444-2]
DR EnsemblMetazoa; ZK180.3c.1; ZK180.3c.1; WBGene00022677. [Q23444-3]
DR GeneID; 177216; -.
DR KEGG; cel:CELE_ZK180.3; -.
DR UCSC; ZK180.3a; c. elegans. [Q23444-1]
DR CTD; 177216; -.
DR WormBase; ZK180.3a; CE07621; WBGene00022677; rfth-1. [Q23444-1]
DR WormBase; ZK180.3b; CE48802; WBGene00022677; rfth-1. [Q23444-2]
DR WormBase; ZK180.3c; CE48641; WBGene00022677; rfth-1. [Q23444-3]
DR eggNOG; KOG2864; Eukaryota.
DR GeneTree; ENSGT00390000011390; -.
DR HOGENOM; CLU_023360_5_0_1; -.
DR InParanoid; Q23444; -.
DR OMA; WPGKLFG; -.
DR OrthoDB; 582756at2759; -.
DR PhylomeDB; Q23444; -.
DR PRO; PR:Q23444; -.
DR Proteomes; UP000001940; Chromosome IV.
DR Bgee; WBGene00022677; Expressed in pharyngeal muscle cell (C elegans) and 4 other tissues.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IBA:GO_Central.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0006488; P:dolichol-linked oligosaccharide biosynthetic process; IEA:InterPro.
DR GO; GO:0034203; P:glycolipid translocation; IBA:GO_Central.
DR InterPro; IPR007594; RFT1.
DR PANTHER; PTHR13117; PTHR13117; 1.
DR Pfam; PF04506; Rft-1; 1.
PE 3: Inferred from homology;
KW Alternative splicing; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..522
FT /note="Protein RFT1 homolog"
FT /id="PRO_0000311289"
FT TRANSMEM 35..55
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 75..95
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 108..128
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 143..165
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 177..197
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 322..342
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 354..374
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 400..420
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 457..477
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 479..499
FT /note="Helical"
FT /evidence="ECO:0000255"
FT VAR_SEQ 1..379
FT /note="Missing (in isoform c)"
FT /evidence="ECO:0000305"
FT /id="VSP_053991"
FT VAR_SEQ 1..148
FT /note="Missing (in isoform b)"
FT /evidence="ECO:0000305"
FT /id="VSP_029511"
SQ SEQUENCE 522 AA; 58155 MW; 14C0196D6D23E8CE CRC64;
MSLFSSLVHN VRGQLIARII SFAINMYLLR RINNDVLGLV NVRLTLLYSS ILFLTREPLR
KAEIIRGSLP KFINLLWLSP IISTVISVVC VYLWYAFSST SDEVSWSVLL SFPISAIIES
IAEPFSVISL RLESKCGSLA QHFAIGQGML ICVKRIFVLA GLFMFPGMYH LELFAYAQYI
GAIAYLLFNF VAFYIYIRNK SIPELEQFST FSDLFPKFSE GIDRDSIHAV FTMFSHSILK
QLLTDGSAYV MTFTELLSLK DQAVYDAVER VGSIIVRTIL SPIDENCNAY FSNTIRKESS
VFNKNTDNHD DLVDTLSKVL HVVGVIGFVA CTFGIPYSPV VISLYGGKLL SENGGALLLS
LYSGYILVTA INGITEGFAM ASMDNRQIFT HGKFLFVTSI IHLIINYVLC VYMNSAGFIV
ANIINMSVRI IYNWRTIREY LGDKCPSFTE VLPTGQTSIF LGVSLLATSF TYLLFATTPG
LSYTLAHIAI GAVCLILTAQ DTAQHDSVFT VIVDSLAKKH RD