RG1BB_DANRE
ID RG1BB_DANRE Reviewed; 475 AA.
AC Q6DBW1;
DT 10-JUN-2008, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=Ras-GEF domain-containing family member 1B-B;
GN Name=rasgef1bb {ECO:0000312|ZFIN:ZDB-GENE-040801-220};
GN Synonyms=rasgef {ECO:0000303|PubMed:17239665}; ORFNames=zgc:91814;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1] {ECO:0000312|EMBL:AAH78340.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000305}
RP DEVELOPMENTAL STAGE.
RX PubMed=17239665; DOI=10.1016/j.modgep.2006.11.010;
RA Epting D., Vorwerk S., Hageman A., Meyer D.;
RT "Expression of rasgef1b in zebrafish.";
RL Gene Expr. Patterns 7:389-395(2007).
CC -!- FUNCTION: Guanine nucleotide exchange factor (GEF) for Ras family
CC proteins. {ECO:0000250}.
CC -!- DEVELOPMENTAL STAGE: Expressed throughout embryogenesis from the
CC blastula sphere stage (4 hours post fertilization).
CC {ECO:0000269|PubMed:17239665}.
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DR EMBL; BC078340; AAH78340.1; -; mRNA.
DR RefSeq; NP_001003479.1; NM_001003479.1.
DR AlphaFoldDB; Q6DBW1; -.
DR SMR; Q6DBW1; -.
DR STRING; 7955.ENSDARP00000064967; -.
DR PaxDb; Q6DBW1; -.
DR Ensembl; ENSDART00000064968; ENSDARP00000064967; ENSDARG00000044251.
DR Ensembl; ENSDART00000182968; ENSDARP00000148041; ENSDARG00000117029.
DR GeneID; 445085; -.
DR KEGG; dre:445085; -.
DR CTD; 445085; -.
DR ZFIN; ZDB-GENE-040801-220; rasgef1bb.
DR eggNOG; KOG3541; Eukaryota.
DR GeneTree; ENSGT00940000155816; -.
DR HOGENOM; CLU_022907_2_0_1; -.
DR InParanoid; Q6DBW1; -.
DR OMA; KKAITQM; -.
DR OrthoDB; 533115at2759; -.
DR PhylomeDB; Q6DBW1; -.
DR TreeFam; TF313379; -.
DR PRO; PR:Q6DBW1; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 10.
DR Bgee; ENSDARG00000044251; Expressed in heart and 24 other tissues.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0005085; F:guanyl-nucleotide exchange factor activity; ISS:UniProtKB.
DR GO; GO:0043547; P:positive regulation of GTPase activity; IBA:GO_Central.
DR GO; GO:0007265; P:Ras protein signal transduction; IBA:GO_Central.
DR CDD; cd00155; RasGEF; 1.
DR CDD; cd06224; REM; 1.
DR Gene3D; 1.10.840.10; -; 1.
DR InterPro; IPR008937; Ras-like_GEF.
DR InterPro; IPR000651; Ras-like_Gua-exchang_fac_N.
DR InterPro; IPR019804; Ras_G-nucl-exch_fac_CS.
DR InterPro; IPR023578; Ras_GEF_dom_sf.
DR InterPro; IPR001895; RASGEF_cat_dom.
DR InterPro; IPR036964; RASGEF_cat_dom_sf.
DR PANTHER; PTHR23113; PTHR23113; 1.
DR Pfam; PF00617; RasGEF; 1.
DR Pfam; PF00618; RasGEF_N; 1.
DR SMART; SM00147; RasGEF; 1.
DR SUPFAM; SSF48366; SSF48366; 1.
DR PROSITE; PS00720; RASGEF; 1.
DR PROSITE; PS50009; RASGEF_CAT; 1.
DR PROSITE; PS50212; RASGEF_NTER; 1.
PE 2: Evidence at transcript level;
KW Guanine-nucleotide releasing factor; Reference proteome.
FT CHAIN 1..475
FT /note="Ras-GEF domain-containing family member 1B-B"
FT /id="PRO_0000341486"
FT DOMAIN 36..166
FT /note="N-terminal Ras-GEF"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00135"
FT DOMAIN 209..456
FT /note="Ras-GEF"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00168"
FT REGION 1..25
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 452..475
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 456..475
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 475 AA; 55441 MW; 079290539F0DE7FD CRC64;
MPQTTPYSSK FNPSAYSSSH SHRQPVEENY GGLHYRDNKL VSGSLEALIQ LLVPTVDYYP
DRSYIFTFLL SSRLFLNPFE LMSRVCYLGV DHHRVGDPQM DKKRIRDIAP KIVQLLTEWT
ETFPYDFRDE RMMRSLKEMT HRLAFGDELS RRAMQRLIQR LLRKLTTLGQ YEESLATTSA
AAAIDRPVAL KSKQQLVRRD DCVLNLCDDP FIFAQQLTHI EMERLSYIGP EEFVRAFAQK
RPSDNHKSFF SKRKASNLEA YVEWFNRLSY LTATEICMPV KKKHRARVLE FFIDVAQECF
NIGNFNSLMA IITGMNMNPV SRLKKTWGKV NTDKFDILVH QMDPSSNFYS YRTALRGATQ
RSSTAHTSQE MIVIPFFSLF IKDIYFLNEG CANRLSNGHI NFEKFWELAK QVSEFLSWRQ
VICPFERDRK TLQYLISAPV FSEDELQLAS YESEGPENNL ERDTRRSLRS SLSRM