RGA2_SOLBU
ID RGA2_SOLBU Reviewed; 970 AA.
AC Q7XBQ9; Q7XA18; Q7XA41;
DT 26-APR-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2003, sequence version 1.
DT 03-AUG-2022, entry version 71.
DE RecName: Full=Disease resistance protein RGA2;
DE AltName: Full=Blight resistance protein RPI;
DE AltName: Full=RGA2-blb;
GN Name=RGA2; Synonyms=177O13.40, CB3A14.5, RB, RPI-BLB1;
OS Solanum bulbocastanum (Wild potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=147425;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND VARIANTS.
RX PubMed=12872003; DOI=10.1073/pnas.1533501100;
RA Song J., Bradeen J.M., Naess S.K., Raasch J.A., Wielgus S.M.,
RA Haberlach G.T., Liu J., Kuang H., Austin-Phillips S., Buell C.R.,
RA Helgeson J.P., Jiang J.;
RT "Gene RB cloned from Solanum bulbocastanum confers broad spectrum
RT resistance to potato late blight.";
RL Proc. Natl. Acad. Sci. U.S.A. 100:9128-9133(2003).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=14675451; DOI=10.1046/j.1365-313x.2003.01934.x;
RA van der Vossen E., Sikkema A., Hekkert Bt B.L., Gros J., Stevens P.,
RA Muskens M., Wouters D., Pereira A., Stiekema W., Allefs S.;
RT "An ancient R gene from the wild potato species Solanum bulbocastanum
RT confers broad-spectrum resistance to Phytophthora infestans in cultivated
RT potato and tomato.";
RL Plant J. 36:867-882(2003).
CC -!- FUNCTION: Disease resistance protein. Resistance proteins guard the
CC plant against pathogens that contain an appropriate avirulence protein
CC via a direct or indirect interaction with this avirulence protein. That
CC triggers a defense system which restricts the pathogen growth. Confers
CC a broad resistance to all known races of P.infestans.
CC -!- INDUCTION: Constitutively expressed.
CC -!- BIOTECHNOLOGY: Can be introduced into cultivated potato (S.tuberosum)
CC or tomato (L.esculentum) to transfer a broad-spectrum late blight
CC resistance to cultivated Solanaceae from sexually incompatible host
CC species.
CC -!- MISCELLANEOUS: Belongs to a four-gene family located at the same locus.
CC Although the four genes are expressed in the resistant haplotype, only
CC RGA2 confers the resistance to P.infestans. In the susceptible
CC haplotype, RGA1 and RGA3 are likely to be pseudogenes created by
CC deletions and mutations, while RGA2 contains also several
CC modifications.
CC -!- SIMILARITY: Belongs to the disease resistance NB-LRR family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAP45164.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=AAP45188.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AY336128; AAP86601.1; -; Genomic_DNA.
DR EMBL; AY303170; AAP45164.2; ALT_SEQ; Genomic_DNA.
DR EMBL; AY303171; AAP45188.2; ALT_SEQ; Genomic_DNA.
DR EMBL; AY426259; AAR29069.1; -; Genomic_DNA.
DR AlphaFoldDB; Q7XBQ9; -.
DR SMR; Q7XBQ9; -.
DR PRIDE; Q7XBQ9; -.
DR GO; GO:0043531; F:ADP binding; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0098542; P:defense response to other organism; IEA:UniProt.
DR CDD; cd14798; RX-CC_like; 1.
DR Gene3D; 1.10.10.10; -; 1.
DR Gene3D; 1.10.8.430; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR Gene3D; 3.80.10.10; -; 2.
DR InterPro; IPR042197; Apaf_helical.
DR InterPro; IPR044974; Disease_R_plants.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR002182; NB-ARC.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038005; RX-like_CC.
DR InterPro; IPR041118; Rx_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR23155; PTHR23155; 1.
DR Pfam; PF13855; LRR_8; 1.
DR Pfam; PF00931; NB-ARC; 1.
DR Pfam; PF18052; Rx_N; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 1: Evidence at protein level;
KW ATP-binding; Leucine-rich repeat; Nucleotide-binding; Plant defense;
KW Repeat.
FT CHAIN 1..970
FT /note="Disease resistance protein RGA2"
FT /id="PRO_0000212778"
FT DOMAIN 135..438
FT /note="NB-ARC"
FT REPEAT 525..548
FT /note="LRR 1"
FT REPEAT 550..571
FT /note="LRR 2"
FT REPEAT 573..594
FT /note="LRR 3"
FT REPEAT 595..619
FT /note="LRR 4"
FT REPEAT 638..662
FT /note="LRR 5"
FT REPEAT 672..697
FT /note="LRR 6"
FT REPEAT 752..777
FT /note="LRR 7"
FT REPEAT 787..811
FT /note="LRR 8"
FT REPEAT 813..832
FT /note="LRR 9"
FT REPEAT 833..857
FT /note="LRR 10"
FT REPEAT 859..882
FT /note="LRR 11"
FT REPEAT 884..906
FT /note="LRR 12"
FT REPEAT 907..931
FT /note="LRR 13"
FT REPEAT 946..970
FT /note="LRR 14"
FT BINDING 182..189
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
FT VARIANT 22
FT /note="V -> A (in susceptible haplotype)"
FT VARIANT 449..540
FT /note="Missing (in susceptible haplotype)"
FT VARIANT 889..894
FT /note="Missing (in susceptible haplotype)"
SQ SEQUENCE 970 AA; 110347 MW; 3727029C3CAD9C47 CRC64;
MAEAFIQVLL DNLTSFLKGE LVLLFGFQDE FQRLSSMFST IQAVLEDAQE KQLNNKPLEN
WLQKLNAATY EVDDILDEYK TKATRFSQSE YGRYHPKVIP FRHKVGKRMD QVMKKLKAIA
EERKNFHLHE KIVERQAVRR ETGSVLTEPQ VYGRDKEKDE IVKILINNVS DAQHLSVLPI
LGMGGLGKTT LAQMVFNDQR VTEHFHSKIW ICVSEDFDEK RLIKAIVESI EGRPLLGEMD
LAPLQKKLQE LLNGKRYLLV LDDVWNEDQQ KWANLRAVLK VGASGASVLT TTRLEKVGSI
MGTLQPYELS NLSQEDCWLL FMQRAFGHQE EINPNLVAIG KEIVKKSGGV PLAAKTLGGI
LCFKREERAW EHVRDSPIWN LPQDESSILP ALRLSYHQLP LDLKQCFAYC AVFPKDAKME
KEKLISLWMA HGFLLSKGNM ELEDVGDEVW KELYLRSFFQ EIEVKDGKTY FKMHDLIHDL
ATSLFSANTS SSNIREINKH SYTHMMSIGF AEVVFFYTLP PLEKFISLRV LNLGDSTFNK
LPSSIGDLVH LRYLNLYGSG MRSLPKQLCK LQNLQTLDLQ YCTKLCCLPK ETSKLGSLRN
LLLDGSQSLT CMPPRIGSLT CLKTLGQFVV GRKKGYQLGE LGNLNLYGSI KISHLERVKN
DKDAKEANLS AKGNLHSLSM SWNNFGPHIY ESEEVKVLEA LKPHSNLTSL KIYGFRGIHL
PEWMNHSVLK NIVSILISNF RNCSCLPPFG DLPCLESLEL HWGSADVEYV EEVDIDVHSG
FPTRIRFPSL RKLDIWDFGS LKGLLKKEGE EQFPVLEEMI IHECPFLTLS SNLRALTSLR
ICYNKVATSF PEEMFKNLAN LKYLTISRCN NLKELPTSLA SLNALKSLKI QLCCALESLP
EEGLEGLSSL TELFVEHCNM LKCLPEGLQH LTTLTSLKIR GCPQLIKRCE KGIGEDWHKI
SHIPNVNIYI