RGAP1_ARATH
ID RGAP1_ARATH Reviewed; 466 AA.
AC Q9FMR1;
DT 26-JUN-2013, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=Rho GTPase-activating protein 1;
DE AltName: Full=Rho-type GTPase-activating protein 1;
GN Name=ROPGAP1; OrderedLocusNames=At5g22400; ORFNames=MWD9.20;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9501997; DOI=10.1093/dnares/4.6.401;
RA Nakamura Y., Sato S., Kaneko T., Kotani H., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. III. Sequence
RT features of the regions of 1,191,918 bp covered by seventeen physically
RT assigned P1 clones.";
RL DNA Res. 4:401-414(1997).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Quinitio C., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF Clones.";
RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Acts as a GTPase activator for the Rac-type GTPase by
CC converting it to an inactive GDP-bound state. {ECO:0000250}.
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DR EMBL; AB007651; BAB08339.1; -; Genomic_DNA.
DR EMBL; CP002688; AED93022.1; -; Genomic_DNA.
DR EMBL; AK229223; BAF01090.1; -; mRNA.
DR EMBL; BT026360; ABH04467.1; -; mRNA.
DR RefSeq; NP_197632.1; NM_122145.5.
DR AlphaFoldDB; Q9FMR1; -.
DR SMR; Q9FMR1; -.
DR BioGRID; 17576; 1.
DR STRING; 3702.AT5G22400.1; -.
DR PaxDb; Q9FMR1; -.
DR PRIDE; Q9FMR1; -.
DR ProteomicsDB; 236962; -.
DR EnsemblPlants; AT5G22400.1; AT5G22400.1; AT5G22400.
DR GeneID; 832301; -.
DR Gramene; AT5G22400.1; AT5G22400.1; AT5G22400.
DR KEGG; ath:AT5G22400; -.
DR Araport; AT5G22400; -.
DR TAIR; locus:2176392; AT5G22400.
DR eggNOG; KOG4270; Eukaryota.
DR HOGENOM; CLU_031591_1_0_1; -.
DR InParanoid; Q9FMR1; -.
DR OMA; DFHASIE; -.
DR OrthoDB; 747695at2759; -.
DR PhylomeDB; Q9FMR1; -.
DR PRO; PR:Q9FMR1; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FMR1; baseline and differential.
DR Genevisible; Q9FMR1; AT.
DR GO; GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.
DR GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR Gene3D; 1.10.555.10; -; 1.
DR Gene3D; 3.90.810.10; -; 1.
DR InterPro; IPR000095; CRIB_dom.
DR InterPro; IPR036936; CRIB_dom_sf.
DR InterPro; IPR008936; Rho_GTPase_activation_prot.
DR InterPro; IPR000198; RhoGAP_dom.
DR InterPro; IPR044785; RopGAP1-5.
DR PANTHER; PTHR23177; PTHR23177; 1.
DR Pfam; PF00786; PBD; 1.
DR Pfam; PF00620; RhoGAP; 1.
DR SMART; SM00285; PBD; 1.
DR SMART; SM00324; RhoGAP; 1.
DR SUPFAM; SSF48350; SSF48350; 1.
DR PROSITE; PS50108; CRIB; 1.
DR PROSITE; PS50238; RHOGAP; 1.
PE 2: Evidence at transcript level;
KW GTPase activation; Reference proteome.
FT CHAIN 1..466
FT /note="Rho GTPase-activating protein 1"
FT /id="PRO_0000422716"
FT DOMAIN 117..130
FT /note="CRIB"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00057"
FT DOMAIN 162..342
FT /note="Rho-GAP"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00172"
FT REGION 1..31
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 65..84
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 354..402
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 360..402
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 466 AA; 51991 MW; 5A727A2E64C0C308 CRC64;
MTEVLHFPSS PSASHSSSSS SSSPSPSSLS YASRSNATLL ISSDHNRRNP VARFDQDVDF
HASIEEQDLR RRSSTDGGEE DDGGEDQISL LALLVAIFRR SLISCKSNRR ELCSMEIGWP
TNVRHVAHVT FDRFNGFLGL PVEFEPEVPR RAPSASATVF GVSTESMQLS YDSRGNCVPT
ILLLMQNCLY SQGGLQAEGI FRLTAENSEE EAVREQLNRG FIPERIDVHC LAGLIKAWFR
ELPTSVLDSL SPEQVMQCQT EEENVELVRL LPPTEAALLD WAINLMADVV QYEHLNKMNS
RNIAMVFAPN MTQMDDPLTA LMYAVQVMNF LKTLIEKTLR ERQDSVVEQA HAFPLEPSDE
SGHQSPSQSL AFNTSEQSEE TQSDNIENAE NQSSSSEISD ELTLENNACE QRETDFGKYR
TGRLSDSSQQ VVLNLDPPAQ WPVGRTKGLT NLSRVGSRVE RTEAWR