RGP2_ORYSJ
ID RGP2_ORYSJ Reviewed; 347 AA.
AC Q7FAY6; A0A0P0WFX2;
DT 28-JUN-2011, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 25-MAY-2022, entry version 103.
DE RecName: Full=Probable inactive UDP-arabinopyranose mutase 2 {ECO:0000303|PubMed:17182701};
DE Short=OsUAM2 {ECO:0000303|PubMed:17182701};
DE AltName: Full=Reversibly glycosylated polypeptide 2 {ECO:0000303|PubMed:17182701};
DE AltName: Full=UDP-L-arabinose mutase 2 {ECO:0000305};
GN Name=UAM2 {ECO:0000303|PubMed:17182701};
GN Synonyms=RGP2 {ECO:0000303|PubMed:17182701};
GN OrderedLocusNames=Os04g0660400 {ECO:0000312|EMBL:BAS91447.1},
GN LOC_Os04g56520 {ECO:0000305};
GN ORFNames=OSJNBa0015K02.13 {ECO:0000312|EMBL:CAE02896.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447439; DOI=10.1038/nature01183;
RA Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y.,
RA Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q.,
RA Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T.,
RA Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R.,
RA Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G.,
RA Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C.,
RA Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J.,
RA Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J.,
RA Li J., Hong G., Xue Y., Han B.;
RT "Sequence and analysis of rice chromosome 4.";
RL Nature 420:316-320(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [6]
RP FUNCTION, SUBUNIT, AND GLYCOSYLATION.
RX PubMed=12011358; DOI=10.1104/pp.010720;
RA Langeveld S.M., Vennik M., Kottenhagen M., Van Wijk R., Buijk A.,
RA Kijne J.W., de Pater S.;
RT "Glucosylation activity and complex formation of two classes of reversibly
RT glycosylated polypeptides.";
RL Plant Physiol. 129:278-289(2002).
RN [7]
RP FUNCTION, LACK OF CATALYTIC ACTIVITY, SUBUNIT, LACK OF GLYCOSYLATION, AND
RP IDENTIFICATION BY MASS SPECTROMETRY.
RX PubMed=17182701; DOI=10.1093/glycob/cwl081;
RA Konishi T., Takeda T., Miyazaki Y., Ohnishi-Kameyama M., Hayashi T.,
RA O'Neill M.A., Ishii T.;
RT "A plant mutase that interconverts UDP-L-arabinofuranose and UDP-L-
RT arabinopyranose.";
RL Glycobiology 17:345-354(2007).
CC -!- FUNCTION: Probable inactive UDP-L-arabinose mutase. Inactive in vitro,
CC but associates with UAM1 and UAM3. {ECO:0000269|PubMed:12011358,
CC ECO:0000269|PubMed:17182701}.
CC -!- SUBUNIT: Heteromers with UAM1 and UAM3. {ECO:0000269|PubMed:12011358,
CC ECO:0000269|PubMed:17182701}.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus {ECO:0000250|UniProtKB:Q9SRT9}.
CC -!- PTM: Is not reversibly glycosylated in vitro by UDP-glucose, UDP-xylose
CC and UDP-galactose. {ECO:0000269|PubMed:12011358}.
CC -!- SIMILARITY: Belongs to the RGP family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AL606608; CAE02896.1; -; Genomic_DNA.
DR EMBL; AP008210; BAF16057.1; -; Genomic_DNA.
DR EMBL; AP014960; BAS91447.1; -; Genomic_DNA.
DR EMBL; AK058644; BAG86762.1; -; mRNA.
DR EMBL; AK071012; BAG92258.1; -; mRNA.
DR EMBL; AK104316; BAG96594.1; -; mRNA.
DR RefSeq; XP_015635492.1; XM_015780006.1.
DR AlphaFoldDB; Q7FAY6; -.
DR STRING; 4530.OS04T0660400-01; -.
DR CAZy; GT75; Glycosyltransferase Family 75.
DR PaxDb; Q7FAY6; -.
DR PRIDE; Q7FAY6; -.
DR EnsemblPlants; Os04t0660400-01; Os04t0660400-01; Os04g0660400.
DR EnsemblPlants; Os04t0660400-02; Os04t0660400-02; Os04g0660400.
DR EnsemblPlants; Os04t0660400-03; Os04t0660400-03; Os04g0660400.
DR GeneID; 107280744; -.
DR Gramene; Os04t0660400-01; Os04t0660400-01; Os04g0660400.
DR Gramene; Os04t0660400-02; Os04t0660400-02; Os04g0660400.
DR Gramene; Os04t0660400-03; Os04t0660400-03; Os04g0660400.
DR KEGG; osa:4337282; -.
DR eggNOG; ENOG502QRG2; Eukaryota.
DR HOGENOM; CLU_061976_0_0_1; -.
DR InParanoid; Q7FAY6; -.
DR OMA; DVWNGLC; -.
DR OrthoDB; 662486at2759; -.
DR PlantReactome; R-OSA-1119574; UDP-L-arabinose biosynthesis and transport.
DR Proteomes; UP000000763; Chromosome 4.
DR Proteomes; UP000059680; Chromosome 4.
DR Genevisible; Q7FAY6; OS.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0005794; C:Golgi apparatus; IBA:GO_Central.
DR GO; GO:0052691; F:UDP-arabinopyranose mutase activity; IBA:GO_Central.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR GO; GO:0009832; P:plant-type cell wall biogenesis; IBA:GO_Central.
DR GO; GO:0033356; P:UDP-L-arabinose metabolic process; IBA:GO_Central.
DR InterPro; IPR004901; RGP.
DR InterPro; IPR037595; RGP_fam.
DR PANTHER; PTHR31682; PTHR31682; 1.
DR Pfam; PF03214; RGP; 1.
DR PIRSF; PIRSF016429; UPTG; 1.
PE 1: Evidence at protein level;
KW Cell wall biogenesis/degradation; Glycoprotein; Golgi apparatus;
KW Reference proteome.
FT CHAIN 1..347
FT /note="Probable inactive UDP-arabinopyranose mutase 2"
FT /id="PRO_0000410990"
FT SITE 145
FT /note="Required for activity"
FT /evidence="ECO:0000250|UniProtKB:Q8H8T0"
FT SITE 152
FT /note="Required for activity"
FT /evidence="ECO:0000250|UniProtKB:Q8H8T0"
FT CARBOHYD 145
FT /note="N-linked (Glc...) arginine"
FT /evidence="ECO:0000250|UniProtKB:Q8H8T0"
SQ SEQUENCE 347 AA; 38907 MW; FC2026DC1E776995 CRC64;
MSLEIQDSEV DIVIAALQPN LTTFFEAWRP FFSRFHIIVV KDPDMAEELQ IPTGFDLKVY
TKSDMGVLGA TSIDFSGHSC RYFGYLVSRK KYVISIDDNC LPAKDNGGLT VDAVAQHMSN
LKTPATPFFF NTLYDPFRKG ADFVRGYPFS LREGVECMLS CGLWLHNADY DPMTHVVKRN
QRNTTYVDAV MTVPLGAMMP VSGINVAFNR EVLGPVMFPA LRLRKEGKHR WDTLEDVWNG
LCAKVVCDRL RYGVKTGLPY VMRSDAEAGK ALESLKEWEG VKVMDVVLPF FESLKLSSTS
VTVEDCVKEL TSIVKEKLGP QNAIFAKAAD AMEEWTKLWK SHGAQSA
