RHAD_BACTN
ID RHAD_BACTN Reviewed; 269 AA.
AC Q8A1A0;
DT 26-APR-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 99.
DE RecName: Full=Rhamnulose-1-phosphate aldolase {ECO:0000255|HAMAP-Rule:MF_00770};
DE EC=4.1.2.19 {ECO:0000255|HAMAP-Rule:MF_00770};
GN Name=rhaD {ECO:0000255|HAMAP-Rule:MF_00770}; OrderedLocusNames=BT_3766;
OS Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 /
OS CCUG 10774 / NCTC 10582 / VPI-5482 / E50).
OC Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC Bacteroides.
OX NCBI_TaxID=226186;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 /
RC VPI-5482 / E50;
RX PubMed=12663928; DOI=10.1126/science.1080029;
RA Xu J., Bjursell M.K., Himrod J., Deng S., Carmichael L.K., Chiang H.C.,
RA Hooper L.V., Gordon J.I.;
RT "A genomic view of the human-Bacteroides thetaiotaomicron symbiosis.";
RL Science 299:2074-2076(2003).
CC -!- FUNCTION: Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate
CC to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde.
CC {ECO:0000255|HAMAP-Rule:MF_00770}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=L-rhamnulose 1-phosphate = (S)-lactaldehyde + dihydroxyacetone
CC phosphate; Xref=Rhea:RHEA:19689, ChEBI:CHEBI:18041,
CC ChEBI:CHEBI:57642, ChEBI:CHEBI:58313; EC=4.1.2.19;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_00770};
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_00770};
CC Note=Binds 1 zinc ion per subunit. {ECO:0000255|HAMAP-Rule:MF_00770};
CC -!- PATHWAY: Carbohydrate degradation; L-rhamnose degradation; glycerone
CC phosphate from L-rhamnose: step 3/3. {ECO:0000255|HAMAP-Rule:MF_00770}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00770}.
CC -!- SIMILARITY: Belongs to the aldolase class II family. RhaD subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00770}.
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DR EMBL; AE015928; AAO78871.1; -; Genomic_DNA.
DR RefSeq; NP_812677.1; NC_004663.1.
DR RefSeq; WP_008766960.1; NZ_UYXG01000036.1.
DR AlphaFoldDB; Q8A1A0; -.
DR SMR; Q8A1A0; -.
DR STRING; 226186.BT_3766; -.
DR PaxDb; Q8A1A0; -.
DR PRIDE; Q8A1A0; -.
DR EnsemblBacteria; AAO78871; AAO78871; BT_3766.
DR GeneID; 60924936; -.
DR KEGG; bth:BT_3766; -.
DR PATRIC; fig|226186.12.peg.3828; -.
DR eggNOG; COG0235; Bacteria.
DR HOGENOM; CLU_076831_0_0_10; -.
DR InParanoid; Q8A1A0; -.
DR OMA; SHFMSHI; -.
DR UniPathway; UPA00541; UER00603.
DR Proteomes; UP000001414; Chromosome.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0016832; F:aldehyde-lyase activity; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0008994; F:rhamnulose-1-phosphate aldolase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0019323; P:pentose catabolic process; IBA:GO_Central.
DR GO; GO:0019301; P:rhamnose catabolic process; IEA:UniProtKB-UniPathway.
DR Gene3D; 3.40.225.10; -; 1.
DR HAMAP; MF_00770; RhaD; 1.
DR InterPro; IPR001303; Aldolase_II/adducin_N.
DR InterPro; IPR036409; Aldolase_II/adducin_N_sf.
DR InterPro; IPR013447; Rhamnulose-1-P_Aldolase.
DR Pfam; PF00596; Aldolase_II; 1.
DR SMART; SM01007; Aldolase_II; 1.
DR SUPFAM; SSF53639; SSF53639; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Lyase; Metal-binding; Reference proteome; Rhamnose metabolism;
KW Zinc.
FT CHAIN 1..269
FT /note="Rhamnulose-1-phosphate aldolase"
FT /id="PRO_0000209656"
FT ACT_SITE 119
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00770"
FT BINDING 142
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00770"
FT BINDING 144
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00770"
FT BINDING 214
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00770"
SQ SEQUENCE 269 AA; 30248 MW; 3CF26E4B458B5B99 CRC64;
MKSILENRPA LAKEVNKVAE VAGYLWQKGW AERNGGNITV NITEFVDDEI RRMEPISEVK
SIGVTLPYLK GCYFYCKGTN KRMRDLARWP MENGSVIRIL DDCASYVIIA DEAVAPTSEL
PSHLSVHNDL LSKNSPYKAS VHTHPIELIA MTHCEKFLQK DVATNLLWSM IPETKAFCPR
GLGIIPYKLP SSVELAEATI KELQDYDVVM WEKHGVFAVD CDAMQAFDQI DVLNKSALIY
IAAKNMGFEP DGMSQEQMKE MSVAFNLPK