RHGB_ASPTN
ID RHGB_ASPTN Reviewed; 526 AA.
AC Q0CFC7;
DT 18-MAY-2010, integrated into UniProtKB/Swiss-Prot.
DT 17-OCT-2006, sequence version 1.
DT 25-MAY-2022, entry version 69.
DE RecName: Full=Probable rhamnogalacturonase B;
DE Short=RGase B;
DE Short=RHG B;
DE EC=3.2.1.171;
DE Flags: Precursor;
GN Name=rhgB; ORFNames=ATEG_07607;
OS Aspergillus terreus (strain NIH 2624 / FGSC A1156).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus;
OC Aspergillus subgen. Circumdati.
OX NCBI_TaxID=341663;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NIH 2624 / FGSC A1156;
RA Birren B.W., Lander E.S., Galagan J.E., Nusbaum C., Devon K., Henn M.,
RA Ma L.-J., Jaffe D.B., Butler J., Alvarez P., Gnerre S., Grabherr M.,
RA Kleber M., Mauceli E.W., Brockman W., Rounsley S., Young S.K., LaButti K.,
RA Pushparaj V., DeCaprio D., Crawford M., Koehrsen M., Engels R.,
RA Montgomery P., Pearson M., Howarth C., Larson L., Luoma S., White J.,
RA Alvarado L., Kodira C.D., Zeng Q., Oleary S., Yandava C., Denning D.W.,
RA Nierman W.C., Milne T., Madden K.;
RT "Annotation of the Aspergillus terreus NIH2624 genome.";
RL Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Pectinolytic enzymes consist of four classes of enzymes:
CC pectine lyase, polygalacturonase, pectin methylesterase and
CC rhamnogalacturonase. Hydrolyzes alpha-D-galacturonopyranosyl-(1,2)-
CC alpha-L-rhamnopyranosyl linkages in the backbone of the hairy regions
CC of pectins (By similarity). {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Endohydrolysis of alpha-D-GalA-(1->2)-alpha-L-Rha glycosidic
CC bond in the rhamnogalacturonan I backbone with initial inversion of
CC anomeric configuration releasing oligosaccharides with beta-D-GalA at
CC the reducing end.; EC=3.2.1.171;
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 28 family. {ECO:0000305}.
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DR EMBL; CH476604; EAU31869.1; -; Genomic_DNA.
DR RefSeq; XP_001216228.1; XM_001216228.1.
DR AlphaFoldDB; Q0CFC7; -.
DR SMR; Q0CFC7; -.
DR EnsemblFungi; EAU31869; EAU31869; ATEG_07607.
DR GeneID; 4322704; -.
DR VEuPathDB; FungiDB:ATEG_07607; -.
DR eggNOG; ENOG502R2FT; Eukaryota.
DR HOGENOM; CLU_016031_7_2_1; -.
DR OMA; PNCQPNI; -.
DR OrthoDB; 1028572at2759; -.
DR Proteomes; UP000007963; Unassembled WGS sequence.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0004650; F:polygalacturonase activity; IEA:InterPro.
DR GO; GO:0046576; F:rhamnogalacturonan alpha-L-rhamnopyranosyl-(1->4)-alpha-D-galactopyranosyluronide lyase activity; ISS:UniProtKB.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR GO; GO:0045490; P:pectin catabolic process; ISS:UniProtKB.
DR Gene3D; 2.160.20.10; -; 1.
DR InterPro; IPR000743; Glyco_hydro_28.
DR InterPro; IPR012334; Pectin_lyas_fold.
DR InterPro; IPR011050; Pectin_lyase_fold/virulence.
DR Pfam; PF00295; Glyco_hydro_28; 1.
DR SUPFAM; SSF51126; SSF51126; 1.
PE 3: Inferred from homology;
KW Carbohydrate metabolism; Cell wall biogenesis/degradation; Disulfide bond;
KW Glycoprotein; Glycosidase; Hydrolase; Polysaccharide degradation;
KW Reference proteome; Secreted; Signal.
FT SIGNAL 1..20
FT /evidence="ECO:0000255"
FT CHAIN 21..526
FT /note="Probable rhamnogalacturonase B"
FT /id="PRO_0000394390"
FT ACT_SITE 218
FT /note="Proton donor"
FT /evidence="ECO:0000250"
FT ACT_SITE 293
FT /evidence="ECO:0000250"
FT CARBOHYD 144
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 238
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 253
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 320
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 41..67
FT /evidence="ECO:0000250"
FT DISULFID 220..237
FT /evidence="ECO:0000250"
FT DISULFID 343..349
FT /evidence="ECO:0000250"
FT DISULFID 371..380
FT /evidence="ECO:0000250"
SQ SEQUENCE 526 AA; 55261 MW; 1FF3741862EDC215 CRC64;
MHVNTLSVLS LVGLVPLAAA RLSGSVGPLT SASAKAATKT CNVLDYGAAA DKTTDLGAPL
ASAFADCKTG GLVYVPPGDY ALESWAQLSG GKAWALQIDG TIYRTGTDGG NMIFIEHSSD
FELFSSTSSG AMQGLGYEFH KDDNWSGPRL LRLYDVSDFA LHDFILVDSP SFHLSLDTCS
NGEVYNMAIR GGNHGALDGV DVWSTNIWIH DVEVTNKDEC VTVKSPAQNI LVENIYCNWS
GGCGMGSLGA DTNISDITYR NVYTWNSNQM MLIKSNGGSG TVSNVVLENF IGHGNAYSLD
IDSAWSSMST QSGDGVEFSN FTIRNWKGTE ANGAERGPVK IICPNGAPCY EMYIEDFAMW
TEEGDEQWYT CQSAFGSGFC LQSGSDYSSY EATTSTATSA PSGYSAPTMA SDLTRDFGST
VSIPIPTIPT SFYPGATPYS ALMGAQSSAS ANVRAVAFGT SAVVSRAGSS SRPAQTGSFL
TKSTTAAAGS IMGPTAAAVQ GVCAPPAGQG RGAARYGGHR RHGHRH