RIBC1_MOUSE
ID RIBC1_MOUSE Reviewed; 379 AA.
AC Q9D0B8; Q9CS97;
DT 31-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 03-AUG-2022, entry version 105.
DE RecName: Full=RIB43A-like with coiled-coils protein 1;
GN Name=Ribc1;
OS Mus musculus (Mouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Mus; Mus.
OX NCBI_TaxID=10090;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=C57BL/6J; TISSUE=Embryo;
RX PubMed=16141072; DOI=10.1126/science.1112014;
RA Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
RA Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
RA Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.,
RA Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R.,
RA Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T.,
RA Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A.,
RA Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B.,
RA Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M.,
RA Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S.,
RA Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
RA Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D.,
RA Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M.,
RA Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H.,
RA Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V.,
RA Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S.,
RA Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H.,
RA Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N.,
RA Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F.,
RA Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G.,
RA Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z.,
RA Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
RA Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
RA Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S.,
RA Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K.,
RA Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R.,
RA van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H.,
RA Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M.,
RA Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C.,
RA Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S.,
RA Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K.,
RA Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M.,
RA Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C.,
RA Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A.,
RA Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.;
RT "The transcriptional landscape of the mammalian genome.";
RL Science 309:1559-1563(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Testis;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- SIMILARITY: Belongs to the RIB43A family. {ECO:0000305}.
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DR EMBL; AK011592; BAB27721.1; -; mRNA.
DR EMBL; AK017461; BAB30754.3; -; mRNA.
DR EMBL; BC050755; AAH50755.1; -; mRNA.
DR CCDS; CCDS30472.1; -.
DR RefSeq; NP_079936.1; NM_025660.2.
DR RefSeq; XP_006529028.1; XM_006528965.3.
DR RefSeq; XP_006529029.1; XM_006528966.3.
DR RefSeq; XP_006529030.1; XM_006528967.3.
DR AlphaFoldDB; Q9D0B8; -.
DR SMR; Q9D0B8; -.
DR IntAct; Q9D0B8; 1.
DR STRING; 10090.ENSMUSP00000026288; -.
DR iPTMnet; Q9D0B8; -.
DR PhosphoSitePlus; Q9D0B8; -.
DR PaxDb; Q9D0B8; -.
DR PRIDE; Q9D0B8; -.
DR ProteomicsDB; 253238; -.
DR Antibodypedia; 12543; 56 antibodies from 15 providers.
DR DNASU; 66611; -.
DR Ensembl; ENSMUST00000026288; ENSMUSP00000026288; ENSMUSG00000025257.
DR GeneID; 66611; -.
DR KEGG; mmu:66611; -.
DR UCSC; uc009upv.1; mouse.
DR CTD; 158787; -.
DR MGI; MGI:1913861; Ribc1.
DR VEuPathDB; HostDB:ENSMUSG00000025257; -.
DR eggNOG; ENOG502QWST; Eukaryota.
DR GeneTree; ENSGT00390000010825; -.
DR HOGENOM; CLU_061822_0_1_1; -.
DR InParanoid; Q9D0B8; -.
DR OMA; KNRREFD; -.
DR OrthoDB; 1276305at2759; -.
DR PhylomeDB; Q9D0B8; -.
DR TreeFam; TF324120; -.
DR BioGRID-ORCS; 66611; 0 hits in 58 CRISPR screens.
DR PRO; PR:Q9D0B8; -.
DR Proteomes; UP000000589; Chromosome X.
DR RNAct; Q9D0B8; protein.
DR Bgee; ENSMUSG00000025257; Expressed in animal zygote and 106 other tissues.
DR Genevisible; Q9D0B8; MM.
DR InterPro; IPR008805; RIB43A.
DR PANTHER; PTHR14517; PTHR14517; 1.
DR Pfam; PF05914; RIB43A; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Reference proteome.
FT CHAIN 1..379
FT /note="RIB43A-like with coiled-coils protein 1"
FT /id="PRO_0000254095"
FT COILED 154..252
FT /evidence="ECO:0000255"
FT COILED 283..335
FT /evidence="ECO:0000255"
SQ SEQUENCE 379 AA; 44962 MW; 5A5A03A21BB059CC CRC64;
MYKLDLVSDP RELAAIEARR NREKERQSRF FNVRNRVMGV DVEALNYQVE ERKFREAIER
NKDIAYGTKH AHYDLVAQML EKEEAERAYR LSKRVQDFRE QRQQQYKNGH EFDFWDPDQF
QEFRVPYYEK DAYFGPASMQ YFFGEDLERA SHVRMQQEQM RYNLEKQLQE QQAAREEEAR
AALLSDQLRL AADTRAAELA RLEESCRAAM RTAMANANKA QAAKQALQQR REQQRQQEAN
LTEVKKQVTS DLLTENPQVA QRANAPHRVL PYCWKGMSAE QRAAIRKTQE TQRQEKKEQR
QAEKLVEAEW GRQNKRLAEA ALELEEQERE LCAEFRRGLG SFNRELAKEQ QAQQNYLNSV
IYTNQPTAHY YLQFNTSSR
