RIC9_ARATH
ID RIC9_ARATH Reviewed; 128 AA.
AC Q1G3Y0; A0MDK0; Q9SYB6;
DT 26-JUN-2013, integrated into UniProtKB/Swiss-Prot.
DT 27-JUN-2006, sequence version 1.
DT 25-MAY-2022, entry version 88.
DE RecName: Full=CRIB domain-containing protein RIC9;
DE AltName: Full=ROP-interactive CRIB motif-containing protein 9;
DE AltName: Full=Target of ROP protein RIC9;
GN Name=RIC9; OrderedLocusNames=At1g61795; ORFNames=T13M11.16;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=17147637; DOI=10.1111/j.1467-7652.2006.00183.x;
RA Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.;
RT "Simultaneous high-throughput recombinational cloning of open reading
RT frames in closed and open configurations.";
RL Plant Biotechnol. J. 4:317-324(2006).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP FUNCTION, INTERACTION WITH ARAC11/ROP1, SUBCELLULAR LOCATION, TISSUE
RP SPECIFICITY, GENE FAMILY, AND NOMENCLATURE.
RX PubMed=11752391; DOI=10.2307/3871538;
RA Wu G., Gu Y., Li S., Yang Z.;
RT "A genome-wide analysis of Arabidopsis Rop-interactive CRIB motif-
RT containing proteins that act as Rop GTPase targets.";
RL Plant Cell 13:2841-2856(2001).
CC -!- FUNCTION: Functions as downstream effector of Rho-related GTP binding
CC proteins of the 'Rho of Plants' (ROPs) family. Participates in the
CC propagation of ROP GTPase signals in specific cellular responses. Is
CC involved in pollen tube growth regulation through its interaction with
CC ARAC11/ROP1. {ECO:0000269|PubMed:11752391}.
CC -!- SUBUNIT: Interacts with ARAC11/ROP1. {ECO:0000269|PubMed:11752391}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000305|PubMed:11752391};
CC Peripheral membrane protein {ECO:0000305|PubMed:11752391}.
CC -!- TISSUE SPECIFICITY: Expressed in roots, leaves, stems, flowers,
CC siliques and pollen. {ECO:0000269|PubMed:11752391}.
CC -!- MISCELLANEOUS: Over-expression of RIC9 in tobacco germinating pollen
CC reduces pollen tube elongation. {ECO:0000305|PubMed:11752391}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD21424.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=ABK28313.1; Type=Erroneous termination; Note=Extended C-terminus.; Evidence={ECO:0000305};
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DR EMBL; AC005882; AAD21424.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE33887.1; -; Genomic_DNA.
DR EMBL; DQ487454; ABF59184.1; -; mRNA.
DR EMBL; DQ652616; ABK28313.1; ALT_SEQ; mRNA.
DR EMBL; AK228428; BAF00361.1; -; mRNA.
DR PIR; H96643; H96643.
DR RefSeq; NP_001077756.1; NM_001084287.3.
DR AlphaFoldDB; Q1G3Y0; -.
DR BioGRID; 624037; 1.
DR STRING; 3702.AT1G61795.1; -.
DR PaxDb; Q1G3Y0; -.
DR PRIDE; Q1G3Y0; -.
DR EnsemblPlants; AT1G61795.1; AT1G61795.1; AT1G61795.
DR GeneID; 5007827; -.
DR Gramene; AT1G61795.1; AT1G61795.1; AT1G61795.
DR KEGG; ath:AT1G61795; -.
DR Araport; AT1G61795; -.
DR TAIR; locus:4010713574; AT1G61795.
DR eggNOG; ENOG502R1IN; Eukaryota.
DR HOGENOM; CLU_1973622_0_0_1; -.
DR InParanoid; Q1G3Y0; -.
DR OMA; SWPFQDL; -.
DR OrthoDB; 1490438at2759; -.
DR PhylomeDB; Q1G3Y0; -.
DR PRO; PR:Q1G3Y0; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q1G3Y0; baseline and differential.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0040008; P:regulation of growth; IEA:UniProtKB-KW.
DR Gene3D; 3.90.810.10; -; 1.
DR InterPro; IPR000095; CRIB_dom.
DR InterPro; IPR036936; CRIB_dom_sf.
DR InterPro; IPR044510; RIC1-like.
DR PANTHER; PTHR46325; PTHR46325; 1.
DR Pfam; PF00786; PBD; 1.
DR SMART; SM00285; PBD; 1.
DR PROSITE; PS50108; CRIB; 1.
PE 1: Evidence at protein level;
KW Cell membrane; Growth regulation; Membrane; Reference proteome.
FT CHAIN 1..128
FT /note="CRIB domain-containing protein RIC9"
FT /id="PRO_0000422732"
FT DOMAIN 30..43
FT /note="CRIB"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00057"
FT REGION 84..107
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 84..102
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 128 AA; 14639 MW; C4B9F0962E879116 CRC64;
MATRFKGLYN KSFKCFSDIF DVEEEEEMEI GYPTDVRHVS HIGWDSSSSS APSWLHEFKT
SNNVLEPNSS WPFQDLKSAM EAFGEVESSK EMERESTKQN LKKKLSSKAS LLCNSWSPRF
SRSSKVLA
