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RIF1_HUMAN
ID   RIF1_HUMAN              Reviewed;        2472 AA.
AC   Q5UIP0; A6NC27; C9JBR1; Q5H9R3; Q5UIP2; Q66YK6; Q6PRU2; Q8TE94; Q99772;
AC   Q9H830; Q9H9B9; Q9NVP5; Q9Y4R4;
DT   05-JUL-2005, integrated into UniProtKB/Swiss-Prot.
DT   05-JUL-2005, sequence version 2.
DT   03-AUG-2022, entry version 164.
DE   RecName: Full=Telomere-associated protein RIF1 {ECO:0000305};
DE   AltName: Full=Rap1-interacting factor 1 homolog {ECO:0000305|PubMed:15342490};
GN   Name=RIF1 {ECO:0000303|PubMed:15342490, ECO:0000312|HGNC:HGNC:23207};
OS   Homo sapiens (Human).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
OX   NCBI_TaxID=9606;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), FUNCTION, SUBCELLULAR LOCATION, AND
RP   VARIANTS TYR-2021 AND VAL-2418.
RX   PubMed=15342490; DOI=10.1101/gad.1216004;
RA   Silverman J., Takai H., Buonomo S.B.C., Eisenhaber F., De Lange T.;
RT   "Human Rif1, ortholog of a yeast telomeric protein, is regulated by ATM and
RT   53BP1 and functions in the S-phase checkpoint.";
RL   Genes Dev. 18:2108-2119(2004).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=15815621; DOI=10.1038/nature03466;
RA   Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H., Minx P.,
RA   Wagner-McPherson C., Layman D., Wylie K., Sekhon M., Becker M.C.,
RA   Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E., Kremitzki C., Oddy L.,
RA   Du H., Sun H., Bradshaw-Cordum H., Ali J., Carter J., Cordes M., Harris A.,
RA   Isak A., van Brunt A., Nguyen C., Du F., Courtney L., Kalicki J.,
RA   Ozersky P., Abbott S., Armstrong J., Belter E.A., Caruso L., Cedroni M.,
RA   Cotton M., Davidson T., Desai A., Elliott G., Erb T., Fronick C., Gaige T.,
RA   Haakenson W., Haglund K., Holmes A., Harkins R., Kim K., Kruchowski S.S.,
RA   Strong C.M., Grewal N., Goyea E., Hou S., Levy A., Martinka S., Mead K.,
RA   McLellan M.D., Meyer R., Randall-Maher J., Tomlinson C.,
RA   Dauphin-Kohlberg S., Kozlowicz-Reilly A., Shah N., Swearengen-Shahid S.,
RA   Snider J., Strong J.T., Thompson J., Yoakum M., Leonard S., Pearman C.,
RA   Trani L., Radionenko M., Waligorski J.E., Wang C., Rock S.M.,
RA   Tin-Wollam A.-M., Maupin R., Latreille P., Wendl M.C., Yang S.-P., Pohl C.,
RA   Wallis J.W., Spieth J., Bieri T.A., Berkowicz N., Nelson J.O., Osborne J.,
RA   Ding L., Meyer R., Sabo A., Shotland Y., Sinha P., Wohldmann P.E.,
RA   Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Jones T.A., She X.,
RA   Ciccarelli F.D., Izaurralde E., Taylor J., Schmutz J., Myers R.M.,
RA   Cox D.R., Huang X., McPherson J.D., Mardis E.R., Clifton S.W., Warren W.C.,
RA   Chinwalla A.T., Eddy S.R., Marra M.A., Ovcharenko I., Furey T.S.,
RA   Miller W., Eichler E.E., Bork P., Suyama M., Torrents D., Waterston R.H.,
RA   Wilson R.K.;
RT   "Generation and annotation of the DNA sequences of human chromosomes 2 and
RT   4.";
RL   Nature 434:724-731(2005).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2), SUBCELLULAR LOCATION, TISSUE
RP   SPECIFICITY, DEVELOPMENTAL STAGE, AND VARIANTS SER-836; MET-1362; TYR-2021
RP   AND VAL-2418.
RX   PubMed=15583028; DOI=10.1083/jcb.200408181;
RA   Xu L., Blackburn E.H.;
RT   "Human Rif1 protein binds aberrant telomeres and aligns along anaphase
RT   midzone microtubules.";
RL   J. Cell Biol. 167:819-830(2004).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
RA   Simonsson T.;
RT   "Identification and characterization of human Rif1.";
RL   Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases.
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 35-853 AND 1728-2472 (ISOFORM 1),
RP   AND VARIANTS TYR-2021 AND VAL-2418.
RC   TISSUE=Testis, and Testis carcinoma;
RX   PubMed=17974005; DOI=10.1186/1471-2164-8-399;
RA   Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U.,
RA   Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D.,
RA   Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A.,
RA   Wiemann S., Schupp I.;
RT   "The full-ORF clone resource of the German cDNA consortium.";
RL   BMC Genomics 8:399-399(2007).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 161-1499 AND 2217-2472 (ISOFORM
RP   1), AND VARIANTS SER-836; MET-1362 AND VAL-2418.
RX   PubMed=14702039; DOI=10.1038/ng1285;
RA   Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
RA   Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
RA   Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
RA   Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
RA   Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H.,
RA   Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M.,
RA   Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K.,
RA   Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T.,
RA   Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M.,
RA   Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S.,
RA   Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H.,
RA   Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K.,
RA   Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N.,
RA   Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
RA   Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
RA   Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
RA   Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
RA   Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y.,
RA   Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K.,
RA   Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T.,
RA   Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T.,
RA   Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y.,
RA   Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H.,
RA   Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y.,
RA   Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H.,
RA   Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O.,
RA   Isogai T., Sugano S.;
RT   "Complete sequencing and characterization of 21,243 full-length human
RT   cDNAs.";
RL   Nat. Genet. 36:40-45(2004).
RN   [7]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 2108-2472 (ISOFORM 2), AND
RP   VARIANT VAL-2418.
RC   TISSUE=Brain;
RX   PubMed=9110174; DOI=10.1101/gr.7.4.353;
RA   Yu W., Andersson B., Worley K.C., Muzny D.M., Ding Y., Liu W.,
RA   Ricafrente J.Y., Wentland M.A., Lennon G., Gibbs R.A.;
RT   "Large-scale concatenation cDNA sequencing.";
RL   Genome Res. 7:353-358(1997).
RN   [8]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1454 AND SER-1688, AND
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Cervix carcinoma;
RX   PubMed=17081983; DOI=10.1016/j.cell.2006.09.026;
RA   Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M.;
RT   "Global, in vivo, and site-specific phosphorylation dynamics in signaling
RT   networks.";
RL   Cell 127:635-648(2006).
RN   [9]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-409 AND SER-1579, AND
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Cervix carcinoma;
RX   PubMed=16964243; DOI=10.1038/nbt1240;
RA   Beausoleil S.A., Villen J., Gerber S.A., Rush J., Gygi S.P.;
RT   "A probability-based approach for high-throughput protein phosphorylation
RT   analysis and site localization.";
RL   Nat. Biotechnol. 24:1285-1292(2006).
RN   [10]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1513; THR-1518 AND SER-1542,
RP   AND IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Embryonic kidney;
RX   PubMed=17525332; DOI=10.1126/science.1140321;
RA   Matsuoka S., Ballif B.A., Smogorzewska A., McDonald E.R. III, Hurov K.E.,
RA   Luo J., Bakalarski C.E., Zhao Z., Solimini N., Lerenthal Y., Shiloh Y.,
RA   Gygi S.P., Elledge S.J.;
RT   "ATM and ATR substrate analysis reveals extensive protein networks
RT   responsive to DNA damage.";
RL   Science 316:1160-1166(2007).
RN   [11]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-402; THR-409; SER-1162;
RP   SER-1236; SER-1238; SER-1422; SER-1554; SER-1616; SER-1688; SER-1693;
RP   SER-1810; SER-2144; SER-2172; SER-2196; SER-2205; SER-2260; SER-2339;
RP   SER-2391; SER-2393; SER-2465 AND SER-2471, AND IDENTIFICATION BY MASS
RP   SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Cervix carcinoma;
RX   PubMed=18669648; DOI=10.1073/pnas.0805139105;
RA   Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E.,
RA   Elledge S.J., Gygi S.P.;
RT   "A quantitative atlas of mitotic phosphorylation.";
RL   Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008).
RN   [12]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=19413330; DOI=10.1021/ac9004309;
RA   Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J., Mohammed S.;
RT   "Lys-N and trypsin cover complementary parts of the phosphoproteome in a
RT   refined SCX-based approach.";
RL   Anal. Chem. 81:4493-4501(2009).
RN   [13]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-979; THR-1047; SER-1552;
RP   SER-1554; SER-1579; SER-1688; THR-1806; SER-1971 AND SER-2196, AND
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Leukemic T-cell;
RX   PubMed=19690332; DOI=10.1126/scisignal.2000007;
RA   Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K.,
RA   Rodionov V., Han D.K.;
RT   "Quantitative phosphoproteomic analysis of T cell receptor signaling
RT   reveals system-wide modulation of protein-protein interactions.";
RL   Sci. Signal. 2:RA46-RA46(2009).
RN   [14]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1238; SER-1454; SER-1579;
RP   SER-1688; SER-1810; SER-1873; SER-1876; SER-2161; SER-2172; SER-2176;
RP   SER-2196; SER-2205 AND SER-2393, AND IDENTIFICATION BY MASS SPECTROMETRY
RP   [LARGE SCALE ANALYSIS].
RC   TISSUE=Cervix carcinoma;
RX   PubMed=20068231; DOI=10.1126/scisignal.2000475;
RA   Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L.,
RA   Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M.;
RT   "Quantitative phosphoproteomics reveals widespread full phosphorylation
RT   site occupancy during mitosis.";
RL   Sci. Signal. 3:RA3-RA3(2010).
RN   [15]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=21269460; DOI=10.1186/1752-0509-5-17;
RA   Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T.,
RA   Bennett K.L., Superti-Furga G., Colinge J.;
RT   "Initial characterization of the human central proteome.";
RL   BMC Syst. Biol. 5:17-17(2011).
RN   [16]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-782; SER-1422; SER-1454;
RP   SER-1542; SER-1554; SER-1576; SER-1579; SER-1688; SER-1873; SER-2144;
RP   SER-2161; THR-2167 AND SER-2393, AND IDENTIFICATION BY MASS SPECTROMETRY
RP   [LARGE SCALE ANALYSIS].
RX   PubMed=21406692; DOI=10.1126/scisignal.2001570;
RA   Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T.,
RA   Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B.;
RT   "System-wide temporal characterization of the proteome and phosphoproteome
RT   of human embryonic stem cell differentiation.";
RL   Sci. Signal. 4:RS3-RS3(2011).
RN   [17]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=22814378; DOI=10.1073/pnas.1210303109;
RA   Van Damme P., Lasa M., Polevoda B., Gazquez C., Elosegui-Artola A.,
RA   Kim D.S., De Juan-Pardo E., Demeyer K., Hole K., Larrea E., Timmerman E.,
RA   Prieto J., Arnesen T., Sherman F., Gevaert K., Aldabe R.;
RT   "N-terminal acetylome analyses and functional insights of the N-terminal
RT   acetyltransferase NatB.";
RL   Proc. Natl. Acad. Sci. U.S.A. 109:12449-12454(2012).
RN   [18]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-402; SER-782; SER-1008;
RP   SER-1162; THR-1220; SER-1236; SER-1238; SER-1422; SER-1454; SER-1513;
RP   SER-1542; SER-1552; SER-1554; SER-1556; SER-1579; SER-1613; SER-1616;
RP   SER-1688; SER-1706; SER-1709; THR-1806; SER-1810; SER-1926; SER-2144;
RP   SER-2161; SER-2172; SER-2176; SER-2196; SER-2205 AND SER-2339, AND
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Cervix carcinoma, and Erythroleukemia;
RX   PubMed=23186163; DOI=10.1021/pr300630k;
RA   Zhou H., Di Palma S., Preisinger C., Peng M., Polat A.N., Heck A.J.,
RA   Mohammed S.;
RT   "Toward a comprehensive characterization of a human cancer cell
RT   phosphoproteome.";
RL   J. Proteome Res. 12:260-271(2013).
RN   [19]
RP   FUNCTION, AND INTERACTION WITH TP53BP1.
RX   PubMed=23333306; DOI=10.1016/j.molcel.2013.01.001;
RA   Escribano-Diaz C., Orthwein A., Fradet-Turcotte A., Xing M., Young J.T.,
RA   Tkac J., Cook M.A., Rosebrock A.P., Munro M., Canny M.D., Xu D.,
RA   Durocher D.;
RT   "A cell cycle-dependent regulatory circuit composed of 53BP1-RIF1 and
RT   BRCA1-CtIP controls DNA repair pathway choice.";
RL   Mol. Cell 49:872-883(2013).
RN   [20]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Liver;
RX   PubMed=24275569; DOI=10.1016/j.jprot.2013.11.014;
RA   Bian Y., Song C., Cheng K., Dong M., Wang F., Huang J., Sun D., Wang L.,
RA   Ye M., Zou H.;
RT   "An enzyme assisted RP-RPLC approach for in-depth analysis of human liver
RT   phosphoproteome.";
RL   J. Proteomics 96:253-262(2014).
RN   [21]
RP   INTERACTION WITH ERCC6.
RX   PubMed=29203878; DOI=10.1038/s41467-017-02114-x;
RA   Batenburg N.L., Walker J.R., Noordermeer S.M., Moatti N., Durocher D.,
RA   Zhu X.D.;
RT   "ATM and CDK2 control chromatin remodeler CSB to inhibit RIF1 in DSB repair
RT   pathway choice.";
RL   Nat. Commun. 8:1921-1921(2017).
RN   [22]
RP   FUNCTION, AND INTERACTION WITH TP53BP1.
RX   PubMed=28241136; DOI=10.1038/nature21358;
RA   Drane P., Brault M.E., Cui G., Meghani K., Chaubey S., Detappe A.,
RA   Parnandi N., He Y., Zheng X.F., Botuyan M.V., Kalousi A., Yewdell W.T.,
RA   Muench C., Harper J.W., Chaudhuri J., Soutoglou E., Mer G., Chowdhury D.;
RT   "TIRR regulates 53BP1 by masking its histone methyl-lysine binding
RT   function.";
RL   Nature 543:211-216(2017).
RN   [23]
RP   INTERACTION WITH SHLD2, AND IDENTIFICATION BY MASS SPECTROMETRY.
RX   PubMed=29789392; DOI=10.15252/embj.201899543;
RA   Tomida J., Takata K.I., Bhetawal S., Person M.D., Chao H.P., Tang D.G.,
RA   Wood R.D.;
RT   "FAM35A associates with REV7 and modulates DNA damage responses of normal
RT   and BRCA1-defective cells.";
RL   EMBO J. 37:0-0(2018).
RN   [24]
RP   VARIANTS [LARGE SCALE ANALYSIS] LYS-1784 AND HIS-1955.
RX   PubMed=16959974; DOI=10.1126/science.1133427;
RA   Sjoeblom T., Jones S., Wood L.D., Parsons D.W., Lin J., Barber T.D.,
RA   Mandelker D., Leary R.J., Ptak J., Silliman N., Szabo S., Buckhaults P.,
RA   Farrell C., Meeh P., Markowitz S.D., Willis J., Dawson D., Willson J.K.V.,
RA   Gazdar A.F., Hartigan J., Wu L., Liu C., Parmigiani G., Park B.H.,
RA   Bachman K.E., Papadopoulos N., Vogelstein B., Kinzler K.W.,
RA   Velculescu V.E.;
RT   "The consensus coding sequences of human breast and colorectal cancers.";
RL   Science 314:268-274(2006).
CC   -!- FUNCTION: Key regulator of TP53BP1 that plays a key role in the repair
CC       of double-strand DNA breaks (DSBs) in response to DNA damage: acts by
CC       promoting non-homologous end joining (NHEJ)-mediated repair of DSBs
CC       (PubMed:15342490, PubMed:28241136). In response to DNA damage,
CC       interacts with ATM-phosphorylated TP53BP1 (PubMed:23333306,
CC       PubMed:28241136). Interaction with TP53BP1 leads to dissociate the
CC       interaction between NUDT16L1/TIRR and TP53BP1, thereby unmasking the
CC       tandem Tudor-like domain of TP53BP1 and allowing recruitment to DNA
CC       DSBs (PubMed:28241136). Once recruited to DSBs, RIF1 and TP53BP1 act by
CC       promoting NHEJ-mediated repair of DSBs (PubMed:23333306). In the same
CC       time, RIF1 and TP53BP1 specifically counteract the function of BRCA1 by
CC       blocking DSBs resection via homologous recombination (HR) during G1
CC       phase (PubMed:23333306). Also required for immunoglobulin class-switch
CC       recombination (CSR) during antibody genesis, a process that involves
CC       the generation of DNA DSBs (By similarity). Promotes NHEJ of
CC       dysfunctional telomeres (By similarity). {ECO:0000250|UniProtKB:Q6PR54,
CC       ECO:0000269|PubMed:15342490, ECO:0000269|PubMed:23333306,
CC       ECO:0000269|PubMed:28241136}.
CC   -!- SUBUNIT: Interacts with TP53BP1 (when phosphorylated by ATM)
CC       (PubMed:23333306, PubMed:28241136). May interact with TRF2 (By
CC       similarity). Interacts with SHLD2 (PubMed:29789392). Interacts with
CC       ERCC6 (via WHD region) (PubMed:29203878).
CC       {ECO:0000250|UniProtKB:Q6PR54, ECO:0000269|PubMed:23333306,
CC       ECO:0000269|PubMed:28241136, ECO:0000269|PubMed:29203878,
CC       ECO:0000269|PubMed:29789392}.
CC   -!- INTERACTION:
CC       Q5UIP0; P62136: PPP1CA; NbExp=4; IntAct=EBI-711331, EBI-357253;
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:15583028}. Chromosome
CC       {ECO:0000250|UniProtKB:Q6PR54}. Chromosome, telomere
CC       {ECO:0000269|PubMed:15342490, ECO:0000269|PubMed:15583028}. Cytoplasm,
CC       cytoskeleton, spindle {ECO:0000269|PubMed:15583028}. Note=Following
CC       interaction with TP53BP1, recruited to sites of DNA damage, such as
CC       DSBs (By similarity). Exhibits ATM- and TP53BP1-dependent localization
CC       to uncapped or aberrant telomeres and to DNA double strand breaks
CC       (DSBs) (PubMed:15342490). Does not associate with normal telomere
CC       structures (PubMed:15342490, PubMed:15583028). Localizes to
CC       microtubules of the midzone of the mitotic spindle during anaphase, and
CC       to condensed chromosomes in telophase (PubMed:15583028).
CC       {ECO:0000250|UniProtKB:Q6PR54, ECO:0000269|PubMed:15342490,
CC       ECO:0000269|PubMed:15583028}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=2;
CC       Name=1;
CC         IsoId=Q5UIP0-1; Sequence=Displayed;
CC       Name=2;
CC         IsoId=Q5UIP0-2; Sequence=VSP_014431;
CC   -!- TISSUE SPECIFICITY: Highly expressed in testis.
CC       {ECO:0000269|PubMed:15583028}.
CC   -!- DEVELOPMENTAL STAGE: Expression peaks in late G2/S phase of the cell
CC       cycle. {ECO:0000269|PubMed:15583028}.
CC   -!- SIMILARITY: Belongs to the RIF1 family. {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAA91705.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC       Sequence=BAB14313.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC       Sequence=BAB14792.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC       Sequence=BAB85058.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC       Sequence=CAI45961.1; Type=Frameshift; Evidence={ECO:0000305};
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DR   EMBL; AY585745; AAT40745.1; -; mRNA.
DR   EMBL; AY727910; AAV51401.1; -; mRNA.
DR   EMBL; AY727911; AAV51402.1; -; mRNA.
DR   EMBL; AY727912; AAV51403.1; -; mRNA.
DR   EMBL; AY727913; AAV51404.1; -; mRNA.
DR   EMBL; AY584066; AAS94233.1; -; mRNA.
DR   EMBL; AC009311; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AC009497; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AL080129; CAB45727.1; -; mRNA.
DR   EMBL; CR933663; CAI45961.1; ALT_SEQ; mRNA.
DR   EMBL; AK001461; BAA91705.1; ALT_INIT; mRNA.
DR   EMBL; AK022932; BAB14313.1; ALT_INIT; mRNA.
DR   EMBL; AK024033; BAB14792.1; ALT_INIT; mRNA.
DR   EMBL; AK074349; BAB85058.1; ALT_INIT; mRNA.
DR   EMBL; U79263; AAB50209.1; -; mRNA.
DR   CCDS; CCDS2194.1; -. [Q5UIP0-1]
DR   CCDS; CCDS54406.1; -. [Q5UIP0-2]
DR   PIR; T12518; T12518.
DR   RefSeq; NP_001171134.1; NM_001177663.1. [Q5UIP0-2]
DR   RefSeq; NP_001171135.1; NM_001177664.1. [Q5UIP0-2]
DR   RefSeq; NP_001171136.1; NM_001177665.1. [Q5UIP0-2]
DR   RefSeq; NP_060621.3; NM_018151.4. [Q5UIP0-1]
DR   RefSeq; XP_005246722.1; XM_005246665.3. [Q5UIP0-1]
DR   AlphaFoldDB; Q5UIP0; -.
DR   SMR; Q5UIP0; -.
DR   BioGRID; 120482; 170.
DR   IntAct; Q5UIP0; 163.
DR   MINT; Q5UIP0; -.
DR   STRING; 9606.ENSP00000243326; -.
DR   GlyConnect; 1791; 3 N-Linked glycans (1 site).
DR   GlyGen; Q5UIP0; 2 sites, 3 N-linked glycans (1 site), 1 O-linked glycan (1 site).
DR   iPTMnet; Q5UIP0; -.
DR   MetOSite; Q5UIP0; -.
DR   PhosphoSitePlus; Q5UIP0; -.
DR   SwissPalm; Q5UIP0; -.
DR   BioMuta; RIF1; -.
DR   DMDM; 68565701; -.
DR   CPTAC; CPTAC-3254; -.
DR   EPD; Q5UIP0; -.
DR   jPOST; Q5UIP0; -.
DR   MassIVE; Q5UIP0; -.
DR   MaxQB; Q5UIP0; -.
DR   PaxDb; Q5UIP0; -.
DR   PeptideAtlas; Q5UIP0; -.
DR   PRIDE; Q5UIP0; -.
DR   ProteomicsDB; 65248; -. [Q5UIP0-1]
DR   ProteomicsDB; 65249; -. [Q5UIP0-2]
DR   Antibodypedia; 33653; 140 antibodies from 29 providers.
DR   DNASU; 55183; -.
DR   Ensembl; ENST00000243326.9; ENSP00000243326.4; ENSG00000080345.18. [Q5UIP0-1]
DR   Ensembl; ENST00000428287.6; ENSP00000415691.2; ENSG00000080345.18. [Q5UIP0-2]
DR   Ensembl; ENST00000430328.6; ENSP00000416123.2; ENSG00000080345.18. [Q5UIP0-2]
DR   Ensembl; ENST00000444746.7; ENSP00000390181.2; ENSG00000080345.18. [Q5UIP0-1]
DR   Ensembl; ENST00000453091.6; ENSP00000414615.2; ENSG00000080345.18. [Q5UIP0-2]
DR   GeneID; 55183; -.
DR   KEGG; hsa:55183; -.
DR   MANE-Select; ENST00000444746.7; ENSP00000390181.2; NM_018151.5; NP_060621.3.
DR   UCSC; uc002txl.4; human. [Q5UIP0-1]
DR   CTD; 55183; -.
DR   DisGeNET; 55183; -.
DR   GeneCards; RIF1; -.
DR   HGNC; HGNC:23207; RIF1.
DR   HPA; ENSG00000080345; Low tissue specificity.
DR   MalaCards; RIF1; -.
DR   MIM; 608952; gene.
DR   neXtProt; NX_Q5UIP0; -.
DR   OpenTargets; ENSG00000080345; -.
DR   PharmGKB; PA134933858; -.
DR   VEuPathDB; HostDB:ENSG00000080345; -.
DR   eggNOG; ENOG502QV6C; Eukaryota.
DR   GeneTree; ENSGT00390000012204; -.
DR   HOGENOM; CLU_000989_0_0_1; -.
DR   InParanoid; Q5UIP0; -.
DR   OMA; NKNETYV; -.
DR   OrthoDB; 10400at2759; -.
DR   PhylomeDB; Q5UIP0; -.
DR   TreeFam; TF323789; -.
DR   PathwayCommons; Q5UIP0; -.
DR   Reactome; R-HSA-5693571; Nonhomologous End-Joining (NHEJ).
DR   SignaLink; Q5UIP0; -.
DR   SIGNOR; Q5UIP0; -.
DR   BioGRID-ORCS; 55183; 195 hits in 1080 CRISPR screens.
DR   ChiTaRS; RIF1; human.
DR   GeneWiki; RIF1; -.
DR   GenomeRNAi; 55183; -.
DR   Pharos; Q5UIP0; Tbio.
DR   PRO; PR:Q5UIP0; -.
DR   Proteomes; UP000005640; Chromosome 2.
DR   RNAct; Q5UIP0; protein.
DR   Bgee; ENSG00000080345; Expressed in buccal mucosa cell and 200 other tissues.
DR   ExpressionAtlas; Q5UIP0; baseline and differential.
DR   Genevisible; Q5UIP0; HS.
DR   GO; GO:0000785; C:chromatin; ISS:BHF-UCL.
DR   GO; GO:0140445; C:chromosome, telomeric repeat region; ISS:BHF-UCL.
DR   GO; GO:0000793; C:condensed chromosome; IDA:BHF-UCL.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR   GO; GO:0001939; C:female pronucleus; IEA:Ensembl.
DR   GO; GO:0001940; C:male pronucleus; IEA:Ensembl.
DR   GO; GO:0016604; C:nuclear body; IDA:HPA.
DR   GO; GO:0031965; C:nuclear membrane; IDA:HPA.
DR   GO; GO:0005654; C:nucleoplasm; IDA:HPA.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0005886; C:plasma membrane; IDA:HPA.
DR   GO; GO:0035861; C:site of double-strand break; IDA:UniProtKB.
DR   GO; GO:0051233; C:spindle midzone; IDA:BHF-UCL.
DR   GO; GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
DR   GO; GO:0006974; P:cellular response to DNA damage stimulus; IDA:UniProtKB.
DR   GO; GO:1990830; P:cellular response to leukemia inhibitory factor; IEA:Ensembl.
DR   GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR   GO; GO:2000042; P:negative regulation of double-strand break repair via homologous recombination; IDA:UniProtKB.
DR   GO; GO:0045814; P:negative regulation of gene expression, epigenetic; ISS:BHF-UCL.
DR   GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; ISS:BHF-UCL.
DR   GO; GO:2001034; P:positive regulation of double-strand break repair via nonhomologous end joining; IDA:UniProtKB.
DR   GO; GO:0051574; P:positive regulation of histone H3-K9 methylation; ISS:BHF-UCL.
DR   GO; GO:0045830; P:positive regulation of isotype switching; ISS:UniProtKB.
DR   GO; GO:0035019; P:somatic stem cell population maintenance; IEA:Ensembl.
DR   GO; GO:0031509; P:subtelomeric heterochromatin assembly; ISS:BHF-UCL.
DR   GO; GO:0000723; P:telomere maintenance; ISS:BHF-UCL.
DR   GO; GO:0043247; P:telomere maintenance in response to DNA damage; IDA:BHF-UCL.
DR   Gene3D; 1.25.10.10; -; 1.
DR   InterPro; IPR011989; ARM-like.
DR   InterPro; IPR016024; ARM-type_fold.
DR   InterPro; IPR028566; Rif1.
DR   InterPro; IPR022031; Rif1_N.
DR   PANTHER; PTHR22928; PTHR22928; 3.
DR   Pfam; PF12231; Rif1_N; 1.
DR   SUPFAM; SSF48371; SSF48371; 1.
PE   1: Evidence at protein level;
KW   Alternative splicing; Cell cycle; Chromosome; Cytoplasm; Cytoskeleton;
KW   DNA damage; DNA repair; Nucleus; Phosphoprotein; Reference proteome;
KW   Telomere.
FT   CHAIN           1..2472
FT                   /note="Telomere-associated protein RIF1"
FT                   /id="PRO_0000097333"
FT   REGION          1..25
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1145..1192
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1265..1318
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1398..1464
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1479..1587
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1762..1782
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1846..1889
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1924..2472
FT                   /note="Interaction with condensed chromosomes in telophase"
FT   REGION          1992..2021
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          2170..2446
FT                   /note="Interaction with ERCC6"
FT                   /evidence="ECO:0000269|PubMed:29203878"
FT   REGION          2227..2269
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1146..1165
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1166..1180
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1398..1413
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1416..1464
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1498..1534
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1536..1553
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1554..1587
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1767..1782
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1874..1889
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        2005..2019
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        2227..2267
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOD_RES         402
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:18669648,
FT                   ECO:0007744|PubMed:23186163"
FT   MOD_RES         409
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0007744|PubMed:16964243,
FT                   ECO:0007744|PubMed:18669648"
FT   MOD_RES         782
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21406692,
FT                   ECO:0007744|PubMed:23186163"
FT   MOD_RES         979
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:19690332"
FT   MOD_RES         1008
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:23186163"
FT   MOD_RES         1047
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0007744|PubMed:19690332"
FT   MOD_RES         1162
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:18669648,
FT                   ECO:0007744|PubMed:23186163"
FT   MOD_RES         1220
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0007744|PubMed:23186163"
FT   MOD_RES         1236
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:18669648,
FT                   ECO:0007744|PubMed:23186163"
FT   MOD_RES         1238
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:18669648,
FT                   ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163"
FT   MOD_RES         1422
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:18669648,
FT                   ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163"
FT   MOD_RES         1454
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:17081983,
FT                   ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692,
FT                   ECO:0007744|PubMed:23186163"
FT   MOD_RES         1513
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:17525332,
FT                   ECO:0007744|PubMed:23186163"
FT   MOD_RES         1518
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0007744|PubMed:17525332"
FT   MOD_RES         1542
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:17525332,
FT                   ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163"
FT   MOD_RES         1552
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:19690332,
FT                   ECO:0007744|PubMed:23186163"
FT   MOD_RES         1554
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:18669648,
FT                   ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:21406692,
FT                   ECO:0007744|PubMed:23186163"
FT   MOD_RES         1556
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:23186163"
FT   MOD_RES         1564
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q6PR54"
FT   MOD_RES         1576
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21406692"
FT   MOD_RES         1579
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:16964243,
FT                   ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231,
FT                   ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163"
FT   MOD_RES         1613
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:23186163"
FT   MOD_RES         1616
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:18669648,
FT                   ECO:0007744|PubMed:23186163"
FT   MOD_RES         1688
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:17081983,
FT                   ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:19690332,
FT                   ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692,
FT                   ECO:0007744|PubMed:23186163"
FT   MOD_RES         1693
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:18669648"
FT   MOD_RES         1706
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:23186163"
FT   MOD_RES         1709
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:23186163"
FT   MOD_RES         1806
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0007744|PubMed:19690332,
FT                   ECO:0007744|PubMed:23186163"
FT   MOD_RES         1810
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:18669648,
FT                   ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163"
FT   MOD_RES         1873
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:20068231,
FT                   ECO:0007744|PubMed:21406692"
FT   MOD_RES         1876
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:20068231"
FT   MOD_RES         1926
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:23186163"
FT   MOD_RES         1971
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:19690332"
FT   MOD_RES         2144
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:18669648,
FT                   ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163"
FT   MOD_RES         2161
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:20068231,
FT                   ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163"
FT   MOD_RES         2167
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0007744|PubMed:21406692"
FT   MOD_RES         2172
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:18669648,
FT                   ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163"
FT   MOD_RES         2176
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:20068231,
FT                   ECO:0007744|PubMed:23186163"
FT   MOD_RES         2195
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q6PR54"
FT   MOD_RES         2196
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:18669648,
FT                   ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231,
FT                   ECO:0007744|PubMed:23186163"
FT   MOD_RES         2205
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:18669648,
FT                   ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163"
FT   MOD_RES         2260
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:18669648"
FT   MOD_RES         2339
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:18669648,
FT                   ECO:0007744|PubMed:23186163"
FT   MOD_RES         2391
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:18669648"
FT   MOD_RES         2393
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:18669648,
FT                   ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692"
FT   MOD_RES         2465
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:18669648"
FT   MOD_RES         2471
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:18669648"
FT   VAR_SEQ         2250..2275
FT                   /note="Missing (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:15583028,
FT                   ECO:0000303|PubMed:9110174"
FT                   /id="VSP_014431"
FT   VARIANT         836
FT                   /note="G -> S (in dbSNP:rs2444263)"
FT                   /evidence="ECO:0000269|PubMed:14702039,
FT                   ECO:0000269|PubMed:15583028"
FT                   /id="VAR_022788"
FT   VARIANT         1362
FT                   /note="V -> M (in dbSNP:rs2123465)"
FT                   /evidence="ECO:0000269|PubMed:14702039,
FT                   ECO:0000269|PubMed:15583028"
FT                   /id="VAR_022789"
FT   VARIANT         1686
FT                   /note="R -> G (in dbSNP:rs3732305)"
FT                   /id="VAR_022790"
FT   VARIANT         1784
FT                   /note="E -> K (in a breast cancer sample; somatic
FT                   mutation)"
FT                   /evidence="ECO:0000269|PubMed:16959974"
FT                   /id="VAR_035983"
FT   VARIANT         1862
FT                   /note="V -> I (in dbSNP:rs2444258)"
FT                   /id="VAR_022791"
FT   VARIANT         1955
FT                   /note="D -> H (in a breast cancer sample; somatic
FT                   mutation)"
FT                   /evidence="ECO:0000269|PubMed:16959974"
FT                   /id="VAR_035984"
FT   VARIANT         2021
FT                   /note="N -> Y (in dbSNP:rs2444257)"
FT                   /evidence="ECO:0000269|PubMed:15342490,
FT                   ECO:0000269|PubMed:15583028, ECO:0000269|PubMed:17974005"
FT                   /id="VAR_022792"
FT   VARIANT         2165
FT                   /note="M -> R (in dbSNP:rs16830057)"
FT                   /id="VAR_022793"
FT   VARIANT         2418
FT                   /note="L -> V (in dbSNP:rs1065177)"
FT                   /evidence="ECO:0000269|PubMed:14702039,
FT                   ECO:0000269|PubMed:15342490, ECO:0000269|PubMed:15583028,
FT                   ECO:0000269|PubMed:17974005, ECO:0000269|PubMed:9110174"
FT                   /id="VAR_022794"
FT   CONFLICT        96
FT                   /note="N -> D (in Ref. 1; AAT40745)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        699
FT                   /note="A -> P (in Ref. 6; BAA91705)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        1256
FT                   /note="M -> V (in Ref. 6; BAA91705)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        2316
FT                   /note="R -> G (in Ref. 6; BAB85058)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        2392
FT                   /note="L -> F (in Ref. 6; BAB85058)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        2445..2446
FT                   /note="HE -> RV (in Ref. 6; BAB85058)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        2464
FT                   /note="R -> G (in Ref. 6; BAB85058)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   2472 AA;  274466 MW;  A45DCE3C5F9E052D CRC64;
     MTARGQSPLA PLLETLEDPS ASHGGQTDAY LTLTSRMTGE EGKEVITEIE KKLPRLYKVL
     KTHISSQNSE LSSAALQALG FCLYNPKITS ELSEANALEL LSKLNDTIKN SDKNVRTRAL
     WVISKQTFPS EVVGKMVSSI IDSLEILFNK GETHSAVVDF EALNVIVRLI EQAPIQMGEE
     AVRWAKLVIP LVVHSAQKVH LRGATALEMG MPLLLQKQQE IASITEQLMT TKLISELQKL
     FMSKNETYVL KLWPLFVKLL GRTLHRSGSF INSLLQLEEL GFRSGAPMIK KIAFIAWKSL
     IDNFALNPDI LCSAKRLKLL MQPLSSIHVR TETLALTKLE VWWYLLMRLG PHLPANFEQV
     CVPLIQSTIS IDSNASPQGN SCHVATSPGL NPMTPVHKGA SSPYGAPGTP RMNLSSNLGG
     MATIPSIQLL GLEMLLHFLL GPEALSFAKQ NKLVLSLEPL EHPLISSPSF FSKHANTLIT
     AVHDSFVAVG KDAPDVVVSA IWKELISLVK SVTESGNKKE KPGSEVLTLL LKSLESIVKS
     EVFPVSKTLV LMEITIKGLP QKVLGSPAYQ VANMDILNGT PALFLIQLIF NNFLECGVSD
     ERFFLSLESL VGCVLSGPTS PLAFSDSVLN VINQNAKQLE NKEHLWKMWS VIVTPLTELI
     NQTNEVNQGD ALEHNFSAIY GALTLPVNHI FSEQRFPVAT MKTLLRTWSE LYRAFARCAA
     LVATAEENLC CEELSSKIMS SLEDEGFSNL LFVDRIIYII TVMVDCIDFS PYNIKYQPKV
     KSPQRPSDWS KKKNEPLGKL TSLFKLIVKV IYSFHTLSFK EAHSDTLFTI GNSITGIISS
     VLGHISLPSM IRKIFATLTR PLALFYENSK LDEVPKVYSC LNNKLEKLLG EIIACLQFSY
     TGTYDSELLE QLSPLLCIIF LHKNKQIRKQ SAQFWNATFA KVMMLVYPEE LKPVLTQAKQ
     KFLLLLPGLE TVEMMEESSG PYSDGTENSQ LNVKISGMER KSNGKRDSFL AQTKNKKENM
     KPAAKLKLES SSLKVKGEIL LEEEKSTDFV FIPPEGKDAK ERILTDHQKE VLKTKRCDIP
     AMYNNLDVSQ DTLFTQYSQE EPMEIPTLTR KPKEDSKMMI TEEQMDSDIV IPQDVTEDCG
     MAEHLEKSSL SNNECGSLDK TSPEMSNSNN DERKKALISS RKTSTECASS TENSFVVSSS
     SVSNTTVAGT PPYPTSRRQT FITLEKFDGS ENRPFSPSPL NNISSTVTVK NNQETMIKTD
     FLPKAKQREG TFSKSDSEKI VNGTKRSSRR AGKAEQTGNK RSKPLMRSEP EKNTEESVEG
     IVVLENNPPG LLNQTECVSD NQVHLSESTM EHDNTKLKAA TVENAVLLET NTVEEKNVEI
     NLESKENTPP VVISADQMVN EDSQVQITPN QKTLRRSSRR RSEVVESTTE SQDKENSHQK
     KERRKEEEKP LQKSPLHIKD DVLPKQKLIA EQTLQENLIE KGSNLHEKTL GETSANAETE
     QNKKKADPEN IKSEGDGTQD IVDKSSEKLV RGRTRYQTRR ASQGLLSSIE NSESDSSEAK
     EEGSRKKRSG KWKNKSNESV DIQDQEEKVV KQECIKAENQ SHDYKATSEE DVSIKSPICE
     KQDESNTVIC QDSTVTSDLL QVPDDLPNVC EEKNETSKYA EYSFTSLPVP ESNLRTRNAI
     KRLHKRDSFD NCSLGESSKI GISDISSLSE KTFQTLECQH KRSRRVRRSK GCDCCGEKSQ
     PQEKSLIGLK NTENNDVEIS ETKKADVQAP VSPSETSQAN PYSEGQFLDE HHSVNFHLGL
     KEDNDTINDS LIVSETKSKE NTMQESLPSG IVNFREEICD MDSSEAMSLE SQESPNENFK
     TVGPCLGDSK NVSQESLETK EEKPEETPKM ELSLENVTVE GNACKVTESN LEKAKTMELN
     VGNEASFHGQ ERTKTGISEE AAIEENKRND DSEADTAKLN AKEVATEEFN SDISLSDNTT
     PVKLNAQTEI SEQTAAGELD GGNDVSDLHS SEETNTKMKN NEEMMIGEAM AETGHDGETE
     NEGITTKTSK PDEAETNMLT AEMDNFVCDT VEMSTEEGII DANKTETNTE YSKSEEKLDN
     NQMVMESDIL QEDHHTSQKV EEPSQCLASG TAISELIIED NNASPQKLRE LDPSLVSAND
     SPSGMQTRCV WSPLASPSTS ILKRGLKRSQ EDEISSPVNK VRRVSFADPI YQAGLADDID
     RRCSIVRSHS SNSSPIGKSV KTSPTTQSKH NTTSAKGFLS PGSRSPKFKS SKKCLISEMA
     KESIPCPTES VYPPLVNCVA PVDIILPQIT SNMWARGLGQ LIRAKNIKTI GDLSTLTASE
     IKTLPIRSPK VSNVKKALRI YHEQQVKTRG LEEIPVFDIS EKTVNGIENK SLSPDEERLV
     SDIIDPVALE IPLSKNLLAQ ISALALQLDS EDLHNYSGSQ LFEMHEKLSC MANSVIKNLQ
     SRWRSPSHEN SI
 
 
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