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RIMM_ALKOO
ID   RIMM_ALKOO              Reviewed;         167 AA.
AC   A8MHC3;
DT   05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT   04-DEC-2007, sequence version 1.
DT   25-MAY-2022, entry version 67.
DE   RecName: Full=Ribosome maturation factor RimM {ECO:0000255|HAMAP-Rule:MF_00014};
GN   Name=rimM {ECO:0000255|HAMAP-Rule:MF_00014}; OrderedLocusNames=Clos_1466;
OS   Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii (strain
OS   OhILAs)).
OC   Bacteria; Firmicutes; Clostridia; Eubacteriales; Clostridiaceae;
OC   Alkaliphilus.
OX   NCBI_TaxID=350688;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=OhILAs;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA   Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA   Hauser L., Kyrpides N., Mikhailova N., Stolz J.F., Dawson A., Fisher E.,
RA   Crable B., Perera E., Lisak J., Ranganathan M., Basu P., Richardson P.;
RT   "Complete genome of Alkaliphilus oremlandii OhILAs.";
RL   Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: An accessory protein needed during the final step in the
CC       assembly of 30S ribosomal subunit, possibly for assembly of the head
CC       region. Probably interacts with S19. Essential for efficient processing
CC       of 16S rRNA. May be needed both before and after RbfA during the
CC       maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits
CC       but not for 70S ribosomes. {ECO:0000255|HAMAP-Rule:MF_00014}.
CC   -!- SUBUNIT: Binds ribosomal protein S19. {ECO:0000255|HAMAP-
CC       Rule:MF_00014}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00014}.
CC   -!- DOMAIN: The PRC barrel domain binds ribosomal protein S19.
CC       {ECO:0000255|HAMAP-Rule:MF_00014}.
CC   -!- SIMILARITY: Belongs to the RimM family. {ECO:0000255|HAMAP-
CC       Rule:MF_00014}.
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DR   EMBL; CP000853; ABW19010.1; -; Genomic_DNA.
DR   RefSeq; WP_012159322.1; NC_009922.1.
DR   AlphaFoldDB; A8MHC3; -.
DR   SMR; A8MHC3; -.
DR   STRING; 350688.Clos_1466; -.
DR   EnsemblBacteria; ABW19010; ABW19010; Clos_1466.
DR   KEGG; aoe:Clos_1466; -.
DR   eggNOG; COG0806; Bacteria.
DR   HOGENOM; CLU_077636_3_2_9; -.
DR   OMA; DEFYHAD; -.
DR   OrthoDB; 1497415at2; -.
DR   Proteomes; UP000000269; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0005840; C:ribosome; IEA:InterPro.
DR   GO; GO:0043022; F:ribosome binding; IEA:InterPro.
DR   GO; GO:0042274; P:ribosomal small subunit biogenesis; IEA:UniProtKB-UniRule.
DR   GO; GO:0006364; P:rRNA processing; IEA:InterPro.
DR   Gene3D; 2.40.30.60; -; 1.
DR   HAMAP; MF_00014; Ribosome_mat_RimM; 1.
DR   InterPro; IPR011961; 16S_RimM.
DR   InterPro; IPR027275; PRC-brl_dom.
DR   InterPro; IPR011033; PRC_barrel-like_sf.
DR   InterPro; IPR002676; RimM_N.
DR   InterPro; IPR036976; RimM_N_sf.
DR   InterPro; IPR009000; Transl_B-barrel_sf.
DR   Pfam; PF05239; PRC; 1.
DR   Pfam; PF01782; RimM; 1.
DR   SUPFAM; SSF50346; SSF50346; 1.
DR   SUPFAM; SSF50447; SSF50447; 1.
DR   TIGRFAMs; TIGR02273; 16S_RimM; 1.
PE   3: Inferred from homology;
KW   Chaperone; Cytoplasm; Reference proteome; Ribosome biogenesis.
FT   CHAIN           1..167
FT                   /note="Ribosome maturation factor RimM"
FT                   /id="PRO_1000057113"
FT   DOMAIN          92..165
FT                   /note="PRC barrel"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_00014"
SQ   SEQUENCE   167 AA;  19617 MW;  7765AE1718692F42 CRC64;
     MAKMLRVGKI TNTHGIKGDL KVLPLTDYFE RFEELEWVYI EGFKDKFYIE NIKYKPTLVI
     LSFEGYGDIN LVEKFKDRYL LIDESQRRIL PEDTYYIADI IGLDVFTVKD EYIGKVVDII
     QTGSSEVYVI RMNNLKEIMI PSVKEFMPEI SLEKKRITID PIEGMIE
 
 
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