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RIMM_CLOPE
ID   RIMM_CLOPE              Reviewed;         165 AA.
AC   Q8XJP6;
DT   06-JUN-2002, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2002, sequence version 1.
DT   25-MAY-2022, entry version 96.
DE   RecName: Full=Ribosome maturation factor RimM {ECO:0000255|HAMAP-Rule:MF_00014};
GN   Name=rimM {ECO:0000255|HAMAP-Rule:MF_00014}; OrderedLocusNames=CPE1710;
OS   Clostridium perfringens (strain 13 / Type A).
OC   Bacteria; Firmicutes; Clostridia; Eubacteriales; Clostridiaceae;
OC   Clostridium.
OX   NCBI_TaxID=195102;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=13 / Type A;
RX   PubMed=11792842; DOI=10.1073/pnas.022493799;
RA   Shimizu T., Ohtani K., Hirakawa H., Ohshima K., Yamashita A., Shiba T.,
RA   Ogasawara N., Hattori M., Kuhara S., Hayashi H.;
RT   "Complete genome sequence of Clostridium perfringens, an anaerobic flesh-
RT   eater.";
RL   Proc. Natl. Acad. Sci. U.S.A. 99:996-1001(2002).
CC   -!- FUNCTION: An accessory protein needed during the final step in the
CC       assembly of 30S ribosomal subunit, possibly for assembly of the head
CC       region. Probably interacts with S19. Essential for efficient processing
CC       of 16S rRNA. May be needed both before and after RbfA during the
CC       maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits
CC       but not for 70S ribosomes. {ECO:0000255|HAMAP-Rule:MF_00014}.
CC   -!- SUBUNIT: Binds ribosomal protein S19. {ECO:0000255|HAMAP-
CC       Rule:MF_00014}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00014}.
CC   -!- DOMAIN: The PRC barrel domain binds ribosomal protein S19.
CC       {ECO:0000255|HAMAP-Rule:MF_00014}.
CC   -!- SIMILARITY: Belongs to the RimM family. {ECO:0000255|HAMAP-
CC       Rule:MF_00014}.
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DR   EMBL; BA000016; BAB81416.1; -; Genomic_DNA.
DR   RefSeq; WP_003458412.1; NC_003366.1.
DR   AlphaFoldDB; Q8XJP6; -.
DR   SMR; Q8XJP6; -.
DR   STRING; 195102.gene:10490974; -.
DR   EnsemblBacteria; BAB81416; BAB81416; BAB81416.
DR   GeneID; 29570935; -.
DR   KEGG; cpe:CPE1710; -.
DR   HOGENOM; CLU_077636_3_2_9; -.
DR   OMA; DEFYHAD; -.
DR   Proteomes; UP000000818; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0005840; C:ribosome; IEA:InterPro.
DR   GO; GO:0043022; F:ribosome binding; IEA:InterPro.
DR   GO; GO:0042274; P:ribosomal small subunit biogenesis; IEA:UniProtKB-UniRule.
DR   GO; GO:0006364; P:rRNA processing; IEA:InterPro.
DR   Gene3D; 2.40.30.60; -; 1.
DR   HAMAP; MF_00014; Ribosome_mat_RimM; 1.
DR   InterPro; IPR011961; 16S_RimM.
DR   InterPro; IPR027275; PRC-brl_dom.
DR   InterPro; IPR011033; PRC_barrel-like_sf.
DR   InterPro; IPR002676; RimM_N.
DR   InterPro; IPR036976; RimM_N_sf.
DR   InterPro; IPR009000; Transl_B-barrel_sf.
DR   Pfam; PF05239; PRC; 1.
DR   Pfam; PF01782; RimM; 1.
DR   SUPFAM; SSF50346; SSF50346; 1.
DR   SUPFAM; SSF50447; SSF50447; 1.
DR   TIGRFAMs; TIGR02273; 16S_RimM; 1.
PE   3: Inferred from homology;
KW   Chaperone; Cytoplasm; Reference proteome; Ribosome biogenesis.
FT   CHAIN           1..165
FT                   /note="Ribosome maturation factor RimM"
FT                   /id="PRO_0000163278"
FT   DOMAIN          90..161
FT                   /note="PRC barrel"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_00014"
SQ   SEQUENCE   165 AA;  19236 MW;  616D14F0D1588F52 CRC64;
     MEDLLVVGQI INTHGLRGEM KVMPLTEDMR RFDYLEYVIL KGKKVKVEGV KYFKDKVILK
     LEGINSIEEA EKLKRTYLEI EREDAIELEE DEYFIVDLVG CTVVDTEGFE YGKIKDVIQT
     PSNDVYWVQG KKEVLVPVLK DIVLDINMDE KLITIRPSGE WQYED
 
 
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