位置:首页 > 蛋白库 > RIMM_DEHM1
RIMM_DEHM1
ID   RIMM_DEHM1              Reviewed;         167 AA.
AC   Q3Z8Z0;
DT   27-JUN-2006, integrated into UniProtKB/Swiss-Prot.
DT   27-SEP-2005, sequence version 1.
DT   25-MAY-2022, entry version 86.
DE   RecName: Full=Ribosome maturation factor RimM {ECO:0000255|HAMAP-Rule:MF_00014};
GN   Name=rimM {ECO:0000255|HAMAP-Rule:MF_00014}; OrderedLocusNames=DET0566;
OS   Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195)
OS   (Dehalococcoides ethenogenes (strain 195)).
OC   Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales;
OC   Dehalococcoidaceae; Dehalococcoides.
OX   NCBI_TaxID=243164;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-2266 / KCTC 15142 / 195;
RX   PubMed=15637277; DOI=10.1126/science.1102226;
RA   Seshadri R., Adrian L., Fouts D.E., Eisen J.A., Phillippy A.M., Methe B.A.,
RA   Ward N.L., Nelson W.C., DeBoy R.T., Khouri H.M., Kolonay J.F., Dodson R.J.,
RA   Daugherty S.C., Brinkac L.M., Sullivan S.A., Madupu R., Nelson K.E.,
RA   Kang K.H., Impraim M., Tran K., Robinson J.M., Forberger H.A., Fraser C.M.,
RA   Zinder S.H., Heidelberg J.F.;
RT   "Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides
RT   ethenogenes.";
RL   Science 307:105-108(2005).
CC   -!- FUNCTION: An accessory protein needed during the final step in the
CC       assembly of 30S ribosomal subunit, possibly for assembly of the head
CC       region. Probably interacts with S19. Essential for efficient processing
CC       of 16S rRNA. May be needed both before and after RbfA during the
CC       maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits
CC       but not for 70S ribosomes. {ECO:0000255|HAMAP-Rule:MF_00014}.
CC   -!- SUBUNIT: Binds ribosomal protein S19. {ECO:0000255|HAMAP-
CC       Rule:MF_00014}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00014}.
CC   -!- DOMAIN: The PRC barrel domain binds ribosomal protein S19.
CC       {ECO:0000255|HAMAP-Rule:MF_00014}.
CC   -!- SIMILARITY: Belongs to the RimM family. {ECO:0000255|HAMAP-
CC       Rule:MF_00014}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP000027; AAW40170.1; -; Genomic_DNA.
DR   RefSeq; WP_010936342.1; NC_002936.3.
DR   AlphaFoldDB; Q3Z8Z0; -.
DR   SMR; Q3Z8Z0; -.
DR   STRING; 243164.DET0566; -.
DR   EnsemblBacteria; AAW40170; AAW40170; DET0566.
DR   KEGG; det:DET0566; -.
DR   PATRIC; fig|243164.10.peg.544; -.
DR   eggNOG; COG0806; Bacteria.
DR   HOGENOM; CLU_077636_3_2_0; -.
DR   OMA; DEFYHAD; -.
DR   OrthoDB; 1497415at2; -.
DR   Proteomes; UP000008289; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0005840; C:ribosome; IEA:InterPro.
DR   GO; GO:0043022; F:ribosome binding; IEA:InterPro.
DR   GO; GO:0042274; P:ribosomal small subunit biogenesis; IEA:UniProtKB-UniRule.
DR   GO; GO:0006364; P:rRNA processing; IEA:InterPro.
DR   Gene3D; 2.40.30.60; -; 1.
DR   HAMAP; MF_00014; Ribosome_mat_RimM; 1.
DR   InterPro; IPR011961; 16S_RimM.
DR   InterPro; IPR001611; Leu-rich_rpt.
DR   InterPro; IPR027275; PRC-brl_dom.
DR   InterPro; IPR011033; PRC_barrel-like_sf.
DR   InterPro; IPR002676; RimM_N.
DR   InterPro; IPR036976; RimM_N_sf.
DR   InterPro; IPR009000; Transl_B-barrel_sf.
DR   Pfam; PF05239; PRC; 1.
DR   Pfam; PF01782; RimM; 1.
DR   SUPFAM; SSF50346; SSF50346; 1.
DR   SUPFAM; SSF50447; SSF50447; 1.
DR   TIGRFAMs; TIGR02273; 16S_RimM; 1.
DR   PROSITE; PS51450; LRR; 1.
PE   3: Inferred from homology;
KW   Chaperone; Cytoplasm; Reference proteome; Ribosome biogenesis.
FT   CHAIN           1..167
FT                   /note="Ribosome maturation factor RimM"
FT                   /id="PRO_0000244124"
FT   DOMAIN          93..165
FT                   /note="PRC barrel"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_00014"
SQ   SEQUENCE   167 AA;  18228 MW;  D1726CBA31653C07 CRC64;
     MTQEEEYILI GKVLGVWGIN GGLKIEVLTD FPERFDAGNE LLIGRAPYTI SQTSWQKAQV
     IVHLSEITGI DAAEELSGAQ VEIPAAALKK LPKGVYYDFQ LIGLEVTDLS GNRIGQIKEI
     LHMPSNDIYV SSYGAKEALI PAVKDVVKEI NLQKGQVIID PIPGLLD
 
 
维奥蛋白资源库 - 中文蛋白资源 CopyRight © 2010-2024